Polyodon spathula (Mississippi paddlefish): 121297584
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Entry
121297584 CDS
T07273
Symbol
acsl1a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1a isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00061
Fatty acid biosynthesis
pspa00071
Fatty acid degradation
pspa01100
Metabolic pathways
pspa01212
Fatty acid metabolism
pspa03320
PPAR signaling pathway
pspa04146
Peroxisome
pspa04216
Ferroptosis
pspa04920
Adipocytokine signaling pathway
Module
pspa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121297584 (acsl1a)
00071 Fatty acid degradation
121297584 (acsl1a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121297584 (acsl1a)
09143 Cell growth and death
04216 Ferroptosis
121297584 (acsl1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121297584 (acsl1a)
03320 PPAR signaling pathway
121297584 (acsl1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121297584 (acsl1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121297584 (acsl1a)
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121297584 (acsl1a)
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121297584 (acsl1a)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of breast milk
121297584 (acsl1a)
Exosomal proteins of breast cancer cells
121297584 (acsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121297584
NCBI-ProteinID:
XP_041079916
LinkDB
All DBs
Position
2:complement(49713237..49760448)
Genome browser
AA seq
697 aa
AA seq
DB search
MQAHELLRQLRLPEFGEVRQYVRTLPTNTLMGFGAFAALTTYWYATRPKALKPPCDLALQ
SVEIEGGEYARRSVLIDSDQPMAFYYSDAKTLYENFQRGLHVSNNGPCLGSRKPNQPYEW
ICYQEVSDRAEFLGSGLMHRGHTPTPDQFIGIFAQNRPEWTIAELACYTYSMVSVPLYDT
LGAEAIAYIIEKAEISTIICDTPEKAQLLLECASKGVHPMKTIILMDVFDIDLVGRAKKL
GIEVVSLREIESVGKENRKNPVPPKPDDLAVICFTSGTTGNPKGAMLTHANIVSNAAAFI
KVTKTSCCVSSSDTHVSYLPLAHMFERLVQVLVLCHGARIGFFQGDIRLLMDDLKTLQPT
IFPVVPRLLNRMFDRIFGQANTPLKRWLLDFATKRKEAELKSGIVRNDSVWDKLVFSKVQ
ASLGGKVRLMITGAAPVSSTVLSFLRAALGCQFYEGYGQTECTAGCSMSLPGDWTAGHVG
PPLPCCTVKLVDVTEMNYFASKGEGEVCVKGPNVFKGYLKDPEKTAEALDEDGWLHTGDV
GKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYIRSDPVAQVFVHGDSLQACLVAIT
VPDPEVLPSWAKKRGHEGSFKELCNNKEVKNAILEDMVKLGKEAGLKSFEQIKDTVLHAE
MFSIQNGLLTPTLKAKRGDMRNYFREQIDGLYSNIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcacatgaacttctaagacagctgcgactgcctgagtttggagaggtcaggcaa
tatgttcgaactcttcctacaaacacgctcatgggcttcggagcctttgctgctctcaca
acatactggtatgccaccagacccaaagctctgaaaccgccatgtgacctagccctgcag
tcagtggaaatagagggaggggagtatgcacgaagatcagtgcttattgacagtgaccag
cccatggctttctactacagtgatgccaagacgttgtatgaaaattttcagagaggctta
catgtttccaataatggcccctgcctgggatccagaaaaccaaaccagccatatgaatgg
atatgctaccaagaggtgtcagacagagcagagttcctgggatctggattaatgcacaga
ggacacacgccaacgcctgaccagttcattggaatttttgctcaaaacagacctgagtgg
acaattgctgaactcgcgtgctacacctactccatggtgtcggtcccactgtatgacacc
ctaggagccgaggccattgcttacattatcgaaaaagcggaaatctccaccataatctgt
gacactcctgagaaagcccagcttcttctagagtgtgcttctaaaggagtccacccgatg
aaaactatcatcctcatggatgtttttgatattgacctggtggggcgagcaaagaaattg
gggattgaagttgtcagtctgagggaaatagagtctgttggaaaggaaaaccggaagaat
ccagtgcctccaaagccagatgatctggcggttatatgttttaccagtggaaccactgga
aaccccaaaggagcaatgcttactcatgcaaacattgtatccaatgcagctgcttttatc
aaagtcacaaagacgtcctgctgtgtaagctccagtgacactcatgtgtcctatttacct
cttgcacatatgtttgagcggttagtacaggttctagttttgtgccatggagcccggata
ggattttttcaaggtgacatcagacttcttatggatgacctaaagacattacagcccacc
atatttcctgtagtgccccgtctgctcaacagaatgtttgacaggatatttggacaagcc
aacacccctttgaaaaggtggctgctggactttgcgactaagaggaaggaagcggagctg
aaaagtggaattgtgaggaacgacagcgtgtgggacaagctcgtcttcagcaaagtacag
gctagcctgggtggtaaagtacgtctcatgataaccggagcggctcctgtctcttcaaca
gttctgagtttcctcagggctgccctgggctgccagttttatgaaggctatgggcaaact
gagtgcacagctgggtgttctatgtcattgcctggagactggacagcaggtcacgttgga
ccaccattgccatgctgcactgtcaagctggttgatgtgacggaaatgaattactttgct
tctaaaggggagggagaggtttgtgtgaaagggccaaatgtattcaaaggctatctgaag
gaccctgaaaaaacggctgaagctcttgatgaagatggttggctgcacacaggagatgtt
gggaaatggttaccgaatggcactctgaagatcattgacagaaagaagcatatcttcaaa
ctggcccagggagaatacattgcaccagagaaaattgaaaacatttacattcgaagtgat
cctgttgctcaggtgtttgtccatggagacagtctgcaggcttgcctcgtggcaatcaca
gtgccagatccagaggttttgcccagctgggctaagaagagagggcatgaaggctcattt
aaagagttgtgtaataacaaggaagtgaagaatgctatcttggaagacatggtgaaactg
ggaaaggaagccggtttgaaatcatttgaacagattaaagatacagttcttcatgcagag
atgttctccattcagaacggcctgctaactccaacactgaaggcaaaaagaggggatatg
agaaactacttccgggaacagattgatggtttgtactccaacatcaagatgtaa
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