Polyodon spathula (Mississippi paddlefish): 121297595
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Entry
121297595 CDS
T07273
Name
(RefSeq) small G protein signaling modulator 1-like isoform X1
KO
K21847
small G protein signaling modulator 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121297595
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121297595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_RBD
RUN
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
121297595
NCBI-ProteinID:
XP_041079944
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All DBs
Position
22:27063954..27102206
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AA seq
1182 aa
AA seq
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MATAMAEAETRQKLLRTVKKEVKQIMEEAVTRKFVHEDSSHIVSFCAAVEACVLHGLKRR
AAGFLRSNKIAALFMKVGKSFPLADELCRKAQELEQIIESKRNQIPLNPDSTRKLQKLPS
VSPQVIKHLWIRTALIEKVLDKIVHYLVENSSKFYEKEAVLMDPVDGPILASLLVGPCAL
EYTKMKTADHFWTDPSADELVQRHRIHSGHCRQDSPTKRPALCIQKRHSSGSMDDRLSPS
ARDYVESLHQNSRATLLFGKNNVLVQPKDDMEAIPGYLSLHQTADIMTLKWTPNQLMNGS
VGDLDYEKSVYWDYAMTIRLEEIVYLHCHQLVDSGGTVVLVSQDGIQRPPLRFPKGGHLL
QFLSCLENGLLPRGQLDPPLWSQRGKGKVFPKLRNRSPHGSPESVSDKEEEEATDYVFRI
LFPGSQSEFVTIIHCRHHHHPRPSPSSLSRSLSLNLRKLPPRRVPAGRILVIPKHSSSFS
GRSSQTPAPNPSRTRHGLSQDLMDQGAALWHPTARKSSCSSCSQNGSSDAGPPNDCNRER
APLKLLCDNMKYQIISRAFYGWFAYCRHMSTVRTHLSALVNHTIVDRDVPHEAGGGLTAE
MWQKYLQDCKVYEEQELLRLVYFGGVEPTIRREVWPFLLGHYQFGMSENDRKEVDDQMRA
CYEQTMSEWLGCEAIVRQREKEQHAAALAKCSSGASLDSTMQKMMHHDSTVSNESSQSCS
SDRQSHARLQSDSSSSTQVFESAEEMEQIETEVRAEESVKAAKRPNGTAPNGTCSPDSGH
PSSRNFSITSGFSDRSFSTEDSGAGTESAVKTSGQQPPQAPTKQKQEGASPSKKTPVQGI
EDAARGQATEETVPPVSKGAAEQTRPDSLTTNASSEDLLSATELPSEEGPLPGVVAGLPM
LEMQLDEEAEKQSLVGSEDNLSEEPEMESLFPQFVSLAVGAEGKTEATSPVTSIGVTYSQ
ELLDMYTINLHRIEKDVQRCDRNYWYFTPANLEKLRNIMCSYIWQHLEIGYVQGMCDLLA
PLLVILDDEAMAFSCFTELMKRMNHNFPHGGDMDTHFANMRSLIQILDSELFELMHQNGD
YTHFYFCYRWFLLDFKRELVYDDVFSVWETIWAAKHTSSTHFVLFIALAMVEMYRDIILE
NNMDFTDIIKFFNEMAEHHNSKRVLTLARDLVYKVQTLIENK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagctatggcagaggctgagacgcgtcagaaactgctacgcactgtcaaaaaa
gaggtgaagcagatcatggaggaggcagtgactcggaagtttgtgcacgaggacagcagc
cacattgtttcattctgcgctgcggtggaagcgtgtgtgttgcacggactgaagcgccgg
gctgccgggttcctccgcagcaacaagatcgcagcgctgttcatgaaggtggggaagagc
ttccctctggctgacgaactctgcaggaaggcacaagagctggagcagatcatcgagagc
aagaggaaccagatccccttgaatcctgatagtactcggaagctgcagaaactgcccagc
gtgtctccccaggtcatcaagcatctatggatccgcacagccctcattgaaaaagttctg
gacaagatcgttcactacctagtggagaacagcagtaagttctatgagaaggaggctgtg
ctgatggacccagtggacggaccaatacttgcatccttgctggtgggtccctgtgccctg
gagtacaccaagatgaagacagcggatcacttctggacagacccctctgcagacgagctg
gtccagaggcatcgcattcacagcgggcactgccggcaggactctcccaccaagcgccct
gctctttgtatccagaagaggcactccagcggtagtatggatgaccgtctctccccctca
gcccgtgactatgtggagtccctgcaccagaactccagggccacgctgctctttggcaag
aacaatgtcctggtgcagccgaaggacgatatggaagccatcccggggtacctgtctctc
caccagaccgcagacatcatgaccctgaagtggacacccaaccagctgatgaacggctct
gtgggagatttagactatgagaagagtgtttattgggactatgccatgaccatccgtctg
gaagagattgtgtatttgcactgtcaccagcttgtggacagcggtgggacagtggtgctg
gtgagtcaggatgggatccagcgcccccccctgcgattcccgaagggggggcacctcctg
cagttcctgtcctgcctggagaacgggctcctgcctcgcggacaacttgaccctccgctc
tggtctcagcggggaaaggggaaggttttcccgaagctgcgaaacagaagtccgcatgga
tccccggagtctgtgtccgacaaggaggaagaggaagccacggactacgtgttcaggatc
ctcttcccaggcagccagtccgagttcgttaccattatccattgccgtcaccatcatcac
cctcgtccctctccctcctccctgtcccgctccctctccctgaacctccggaaactcccc
cctaggcgtgttcctgctggccggatcctggttatccccaaacactcctccagtttctct
ggcaggagcagccagactcctgcacccaaccccagcaggacacggcatggcttatcgcag
gacctcatggaccagggggcggccctgtggcaccccactgccaggaagtcctcctgctct
tcctgttcccaaaatggctcctcagacgcagggcctccaaacgactgcaaccgtgagcgg
gcccctctgaagttgctgtgtgacaacatgaagtatcagatcatttccagagctttctac
ggctggtttgcgtattgccgtcacatgtccactgtgcgcacgcacctgtctgcgctggtg
aaccacaccattgtggaccgggacgtcccacacgaggccggcggcgggctgacagcagag
atgtggcagaaatacctccaggactgtaaggtttatgaggagcaggagctgctgcggctg
gtttacttcggaggggtggaacccacaatccgcagggaggtgtggcccttcttgctgggg
cactaccagttcgggatgtcggagaatgaccggaaagaggtagatgaccagatgcgtgcc
tgctatgagcagacgatgagtgagtggctgggctgcgaggcgatcgttcgccagcgggag
aaggagcagcacgccgctgccctcgccaagtgctcctcaggagccagtctggacagcacg
atgcagaagatgatgcaccatgactccaccgtcagcaacgagtcttcccagagctgcagc
tcggacagacagagccatgcgcggctgcagagcgactccagcagcagcacacaggtgttc
gagtctgcggaggagatggagcagatagagacggaggtgagggccgaggagagcgtcaag
gcagccaaacgtcccaatggaaccgcccccaacggaacctgctctcctgattccggacac
ccttcctcccggaacttctccatcacctccggattctccgaccgcagcttcagcaccgag
gacagcggtgccggcaccgagtctgcagttaaaacatctggacagcagcctccacaagca
ccgaccaaacagaagcaagagggagccagccccagcaagaagactccagttcagggcata
gaagatgccgctcggggtcaggcgactgaagagaccgtccctcccgtctccaaaggggct
gctgaacagacccggcccgacagtctgaccaccaacgcgagttcggaggatcttctgtct
gccactgagctgccctcagaggaggggcctctcccaggggtggtggctgggcttcctatg
ctggagatgcagctggacgaggaagctgagaagcagagcctggtgggcagcgaggacaac
ctttctgaggagcctgaaatggagagcctgttcccccagtttgtctcgctggctgtggga
gcggagggtaaaaccgaagccacgtcccctgtcacttccattggggtcacctactctcag
gagctgctggacatgtacacaatcaacctgcaccgtatcgagaaagacgtgcagaggtgc
gaccgaaactactggtacttcactcctgccaatctggagaaactgcgcaacatcatgtgc
agctacatctggcagcacctggagatcgggtatgtgcaaggcatgtgcgacctgttagct
cccctgctggtcattctcgatgacgaggcaatggccttcagctgcttcacggagctcatg
aagaggatgaaccacaacttccctcacggaggagacatggatacacacttcgccaacatg
cgctccctcatccagatcctggactccgagctctttgagctgatgcaccagaatggggat
tacacacatttctatttctgctaccgctggttccttctggacttcaaacgagaactggtg
tacgatgatgtgttctcagtgtgggagactatctgggctgcgaagcacacgtcatcgacc
cacttcgtgctcttcatcgctctggcaatggtggaaatgtacagagacatcatcctggaa
aacaacatggacttcaccgacatcatcaagttcttcaacgaaatggctgaacaccacaat
agcaagcgtgtgctgacgttggcacgggacctggtctacaaagtgcagacactcatcgag
aacaagtga
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