Polyodon spathula (Mississippi paddlefish): 121297596
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Entry
121297596 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121297596
04082 Neuroactive ligand signaling
121297596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121297596
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121297596
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121297596
NCBI-ProteinID:
XP_041079948
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All DBs
Position
22:complement(5116063..5146685)
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AA seq
477 aa
AA seq
DB search
MVTMAPLNVTPKCSTAMAKPAYSLRMILWSFLIASLPTSSLQKEDDDYEDFSSNKTWVLT
PKVYESDVTHILNSLLDGYDNKLRPDIGVKPTIIHTDMYVNSIGPVNAINMEYTIDIFFA
QTWYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRI
LYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIIYQWKRSSVEIGDTRSWRLY
QFSFVGLRNTTEVVKTTSGDYVVMTVFFELSRRMGYFTIQTYIPCTLIVVLSWVSFWINK
DAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFLFVFAALIEYGTLHY
FISNRNPSKPGKKRKNPLLRLFSSKTPTVDIRPRSATAIQMNNTTHLQERDEEYGYECLD
GKDCSSFFCCFEDCRSGAWRHGRIHIRVSKIDSYARIFFPTAFGLFNLVYWISYLYL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccatggctcctctaaatgtaacacccaaatgctcgactgcgatggcgaaacct
gcttattctttaagaatgattctgtggtcctttctaattgctagtcttcctacaagctct
ctacaaaaagaagatgatgactatgaagatttctcctcaaacaaaacctgggtgttgact
ccaaaggtgtatgagagtgatgtcactcacattttaaatagcttgctggatggatatgac
aacaagctgagaccagatataggagtcaaaccaactatcattcacacagacatgtatgtg
aatagcattggtccagtgaatgccataaacatggagtatacaattgatatattttttgcg
caaacctggtatgatagacgtttgaaatttaatagcacaatgaaggtgctccggcttaac
agtaatatggtgggcaagatttggatccctgacaccttctttcggaactcaaaaaaggcg
gatgctcattggataacaacacccaatcgaatgcttaggatctggaacgatgggaggata
ctgtatacactaaggttaactattgatgctgagtgccagttaaaactgaacaatttcccc
atggatgagcattcctgtcctctggagttctcaagctatggctatccaagagaagagatt
atttaccagtggaagaggagctctgttgagattggagatactcgatcatggaggctttac
caattctcctttgttggcctgagaaatacaacagaggttgtgaagacaacttcaggagat
tatgtggtgatgacagtcttctttgaactaagcaggaggatgggttattttacaattcaa
acctacattccctgcactctgattgttgtgctgtcttgggtgtctttctggattaataag
gatgcagtgcctgccagaacatccttaggaatcacaactgttctgacaatgaccacactg
agtacaattgctcgtaaatcccttcccaaagtttcctatgtgactgcgatggatttgttt
gtctctgtttgctttcttttcgttttcgctgctctgattgaatacgggaccttgcactac
tttatcagcaacaggaacccgagcaaaccaggcaagaagaggaaaaatcctctccttcgg
ctgttttcttcaaagacgcccactgttgatattcgcccacgctctgctacggccattcag
atgaacaataccacgcaccttcaggagagagatgaggagtacgggtatgagtgtctggat
ggcaaggactgctccagcttcttctgctgttttgaagactgtcggtcaggggcatggcgg
cacggtcgaatacacatccgcgtctccaaaattgactcctatgcccgcatcttcttccct
actgcctttggtttgtttaacttagtatactggatctcctatctctatctttag
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