Polyodon spathula (Mississippi paddlefish): 121297735
Help
Entry
121297735 CDS
T07273
Name
(RefSeq) sorbin and SH3 domain-containing protein 2-like isoform X1
KO
K23708
sorbin and SH3 domain-containing protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121297735
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
121297735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Sorb
Motif
Other DBs
NCBI-GeneID:
121297735
NCBI-ProteinID:
XP_041080133
LinkDB
All DBs
Position
2:complement(50024491..50125353)
Genome browser
AA seq
1958 aa
AA seq
DB search
MSVTLRAMKRVQSSPNLYTVSGNDPQSSDSDVWRSCSANDGVRNGDSNSSSLAAKGFRSV
RPNLQDKKSPTLAPPPPPRKDSFHLSPLCNKQNKAPTSFSCSQMHEPPFDVAQLDVQYLT
NEEAVQEDSGNTSTSFSYREKTSFKSKTTTSNFSADGTNVSPQADNSQTQERKVSTLKLT
LSEGQDATNIPSAQQKFNHTAEVKLKEHSSLSPQDPKSQLERHTASLSIQIAPTIVHNTE
PGPVVAQGQSPVRSTETKRMKSTDARQTSSFSSSARSQVLESQTFSAKAAQTGRQTSPEA
SLPPPLVPINRSCFSPDSYTSVELISLLKVEYFLPARLQKTLTLAPYFCSPNSENPLHLS
ETASTATDSIFSEYSSRTLSESSTAILDELQICGFDTTESSETPSPTLSQMSAVTDDSTL
TSTATVTNGQMTVNGNPGITSSPLSHLQRPFSPPPDYPPPPAVNPNSLVMQHSRSMELSE
TMIQEPYSHGYSAVSPVPICRTSEEEKRVSIIKAPHYSGIGPVDESGIPIAMRTTVDRPK
DWYKTMFKQIHMVHKPDDTDGETYNATYAFVNTDNYSSSNPMQAHPAPKTYTYRPLLKSI
SDNSTSTFKDSSPLLPPPPPPMPSLSQLRPQERATPEMNEWGPPDRRVDTRKYRAEPRSI
FEYEPGKSSILQHERPIYGINTDEIDLENEPWYKFFSELEFGRPPPKKLLDYMPESSPGV
STKVSLYHPSAERTPERPSSSASDYRKRRKSEPSVSDQRAHSNQNANQTSPRAADIQGKN
SMLRKPFTSSSPSSPSRAKGGDISKMYSSLLSCSGPSQNASHALDYSCDHNQPFPVTPLG
SKRSISFKNGWQMNRQDAETWSSAEETVSPKPKSRSCDDLLTDEQESLAEMQTRSESVGS
LMCDEELKDSYFRVCSEGSEPRRPRARHRSAHNAPGFLKLYRKMHHINRKDLLSSEVICS
VKSRILQYEQEQHKCMLAGWREFSEEVPRDMVPTRISEFEKMIQKSKSMPNLVDETLSDG
TLDSSKRGTCPKRRFSIESLLDEEHPNRNPTEGQKQFYKSKTVVPIHIEVTNEHQQLTAS
QFDYSCSERDAVVSDLSDFVQIEGSSFCSDSDFDHFSFTSSESFYGSGHHHQHHHHHKHL
VSSCKDRCPASNTRFTTMLKHERAKQERKQQLKKEEAKSGLSKLAFLVSPVPFRRKKCLP
PQKRTQKPQSKTSVYEALDSALKDIYEHIKAEKRRGSLPDNSILHRLLAELLPDIPERNS
SLKAMRRRSPLKQPYQQQPQDGLVNYTSYQTDSERLPLSSSYQDMDTNNNQGNDHAQCYQ
ARESSRGFSSFADVGRYNPTRGTPDREKQQARAIYDFKAQTSKELTFKKGDTVYILRQID
QNWYEGEHHGRVGIFPISYVEKLSSTEKSQPARPPPPAQIREIGEAVAKYTFTADTNVEL
SLRKGERVVLLRQVDQNWYEGKIPGTGKQGIFPVSYVDFIKKGSNRNPGDCPDPSIPQSY
SSDMIHTLAATKTSSHPRFSTPSPTLRHHSSPSLIPQKNPDIQAITSEWLSLTVGMSPSS
TPAPTPPPFPSSLLSGLEELNSLAPLASTSLGTSSPRTITSQVQKGHFIPITSSKAFSSS
PQTIHSPEPYPVPRSLSLFLTSSPLHEHTHKCGSGMTLDENKTKDISEKQSRNAIDVEKK
EVSFSDTTELYKHRETGHLVISESSEPRSSDTTLQVREDQEEELCKELLSIIQGNQNREL
QKDTGFYRRAADVLEELPKLYIEEEPCETKKTSTSSKSIARVTSEDSKSRHSQKEASASP
GVSPPLSSSPSNLPFVSSLSVHSSKSSPSASPQPAVTHSPPLSSKLSPRLESRSPKLKPA
LKCDVVVVGKPPRSPVMSRRSCGSPVRGQSFSPSHRPQLPVLVQDNLQSGGEPNEDELEL
NEGDVIDVMEKCDDGWFVGTSRRNKLFGTFPGNYVKRL
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcacattaagagctatgaagagagtccagagttctccaaacctatatacggtt
tcaggtaatgacccccagtcatcagattcagatgtctggagatcttgcagtgctaatgat
ggggttagaaatggtgattcaaacagttcgtctcttgcagccaaaggcttcagaagcgtc
aggccgaatctacaagacaagaagtctccaacactggccccacctccaccccctaggaaa
gacagctttcacttgtcccctctttgcaataagcaaaataaagcacctactagttttagc
tgtagtcaaatgcatgaaccaccctttgatgttgcccagttagatgttcaatatttaaca
aatgaggaggctgtgcaagaagattctggaaacaccagtacatctttttcttatagagag
aagacctcctttaaatctaagacaacaacttctaatttttcagcagatggcactaatgtc
tctcctcaagccgataacagccagactcaagaacgcaaagtttctaccctcaaattaacc
ttatcagaaggtcaagatgccactaatattcccagtgcacagcagaagtttaaccacact
gcagaagtaaaacttaaagagcactcctccttgtcacctcaagatcctaaaagccagctt
gagagacacacagcttctctttccattcagattgccccaaccattgttcataacacagaa
cctgggcctgtggttgctcaagggcagtcaccagttcgttctacagaaaccaaaagaatg
aaatctacggacgcaagacagacatcttcattctcatcttcagcaaggagtcaagtgctt
gaaagccagacattttctgcaaaagctgctcagacaggcagacaaacctcaccagaagcc
tccctgcctcctccactggtacccattaacagatcatgtttctcacctgacagctacacc
agtgtagagctaattagcttgctgaaagtagagtactttctccctgcacgtctccagaag
accttaaccctagccccatatttctgctccccgaattctgaaaacccactgcacttgagt
gaaacagcatccactgccacagattccattttcagtgaatattcatctcgcacattaagc
gagtcctccacagccattctagatgagcttcagatctgtggctttgacaccactgaaagt
tctgaaacaccttccccgactttgagtcagatgtctgctgtaactgatgactccacctta
acctccactgccacagtcactaatggccagatgacagtgaacggcaacccaggcattact
agcagccctctgagtcacttacaaagacccttctcccctcctccagattatcctcctcca
ccagctgtcaatccaaacagccttgtcatgcagcacagccgcagcatggaattgtctgaa
accatgatacaggaaccctattctcatggctactctgcagtgagcccagtaccgatctgt
aggacgtctgaagaggagaagagagtgtctattattaaagctcctcattattcagggatt
gggccagtagatgaatctggcattccaattgctatgagaacgacggtggacaggccaaag
gattggtataagaccatgttcaagcaaattcatatggtgcacaaaccagatgatacagat
ggtgagacatacaatgccacctatgcatttgtaaatactgataattacagctcatcaaac
ccaatgcaagcacaccctgcgcccaagacatacacataccggcctttgttgaagagcatc
tccgataacagcactagcacctttaaggactcatcacctttgcttccccctcctccacca
ccgatgccatctctatcccagctgagaccacaggagagagccacgcctgaaatgaatgaa
tggggacctccagacagaagagttgatacccgaaaataccgtgctgaacccaggagtatt
tttgagtacgagccagggaaatcatccattttacagcatgaaagaccaatttatggcata
aacaccgatgagatagatttagaaaatgaaccctggtataagttcttttctgaactggaa
ttcggacgtccgcctcctaaaaaacttttggattatatgccagaaagctctccgggtgtc
tccaccaaggtctctttgtatcacccttcagcggagagaacgccagaaagaccgtctagc
tcggcaagtgactatagaaaaagacggaagtctgagccttctgtaagtgatcagagagca
cacagcaatcaaaatgcaaatcaaacctcgccaagggctgccgacatacaggggaagaat
agcatgctcagaaagccatttactagttcttccccctcttctccatctagagcgaaaggt
ggggatattagcaaaatgtactcatcccttttaagttgttcaggtcccagccagaatgcc
tcacatgcgttagactacagttgcgatcacaatcagcctttcccggtcactccactgggc
tcaaagaggtcaatcagtttcaagaacggatggcaaatgaaccggcaagatgcagaaact
tggagtagcgcagaagaaacagtatcgccaaagccgaagtctcgcagctgcgacgatctt
ctgacagatgaacaagagagtttagctgaaatgcaaacgaggtctgaaagtgtggggtca
ctgatgtgtgacgaagaactcaaagattcctattttagggtgtgctctgagggatcagag
ccccgcagacccagagctcgacatagatcagcacacaacgctccaggattcttaaagctg
tacaggaagatgcaccacatcaaccgaaaagacttgttaagctctgaggtgatttgctca
gtaaaatccaggatattacagtatgaacaagaacagcacaaatgcatgcttgcaggctgg
agagagttcagtgaggaggttcccagagacatggtgccaacaaggatttctgaatttgaa
aaaatgatccaaaaatccaaatccatgccaaatcttgttgacgaaacattatctgatggt
actttagactcctctaaaaggggaacatgtcccaagcgccgcttttccattgagtcatta
ctggatgaggaacatccaaacagaaatcccactgaggggcaaaagcagttctacaagtca
aaaactgtggtgccaattcacatcgaagtcaccaatgaacatcagcaactgacagcatcc
caatttgactactcgtgcagcgagcgtgacgcagtggtgtccgacctcagtgactttgtt
cagatcgagggttcttcattttgcagcgatagtgactttgatcatttctccttcacctct
tcggaaagcttttacgggtcaggccaccatcatcaacatcaccaccatcacaaacacctg
gtcagctcctgcaaggacagatgcccagcctccaacaccaggttcaccactatgcttaaa
cacgaaagggctaaacaagaaaggaagcagcagctaaagaaagaagaagccaagtctggc
ttgtcaaagttggcattcctagtcagcccagtgcctttcaggagaaaaaaatgcttgcct
cctcaaaaacgaactcaaaaaccacaatcaaagacctcagtgtatgaagcactggactcg
gctttaaaggacatctatgaacacattaaagctgaaaaaaggagggggagccttccagat
aacagtatattacatagactcctagcagaactgcttcctgatattcctgaaagaaactcc
tccctcaaagccatgaggaggaggagccctttaaaacagccttatcaacagcagccccaa
gatggccttgtgaattatacttcataccagacggattctgaaagattacccctcagttct
tcgtatcaagatatggacaccaacaacaaccaagggaacgatcatgcacagtgttatcaa
gctcgggaatcctctaggggcttttcctcttttgctgatgtgggtcgatataatccaaca
agaggaacaccagatagagagaagcagcaagccagagcaatatatgactttaaggctcaa
acatcaaaggaactgacattcaagaaaggagatacggtctatatcctcaggcaaatcgat
caaaactggtatgagggagaacatcatggccgagtggggatcttccctatttcatatgtt
gagaaactatcatcgacagaaaaatctcagccagcaagaccgcccccgccagcacaaata
agagagataggagaagctgtggccaaatacaccttcacagcagacactaatgtggagttg
tcactgagaaagggagagagagtagtacttcttcgacaagtggatcagaattggtatgaa
ggaaagatacctggaaccggtaaacaaggcatatttccagtgtcatatgtggatttcatc
aagaagggctcaaatagaaacccaggcgactgtccagatccatcaatacctcagagctat
tccagtgatatgatacacaccttagctgctacaaagacttcttcccacccaaggttcagt
actccatcccctactctcagacatcactcctcaccttcccttattccacaaaaaaatcct
gatatccaagctatcaccagtgagtggctctccctgactgttgggatgtctccctccagc
actcctgcccccactccccctcccttcccaagcagcctcctgtctggcttggaagagctc
aactctttggcgccactggcttctacttcactaggaacctcttctccaagaaccatcact
tctcaagttcagaaagggcatttcattccaatcacatcttccaaagccttctccagctca
cctcaaaccatccactcaccagagccgtatcccgtcccaagatcattatcactgttcctc
acctcctcgccgctacacgaacacacccacaagtgtggcagtggcatgacccttgatgaa
aacaaaacaaaggacattagtgagaagcagtccagaaatgccatagatgttgaaaaaaaa
gaggttagtttctctgacaccacggaattgtacaagcacagagaaactggtcatttagtc
atttcagagtcttctgagcctcgctcctcagacacgactctgcaggtcagggaagaccag
gaggaggagctttgcaaagagctgctgtctatcatccaaggaaaccaaaacagggagttg
cagaaggacacagggttttacagacgagcagcagatgtactggaggagcttcccaaactc
tatatagaggaagaaccttgtgaaaccaaaaagacatccacttcatctaaaagcatagcg
cgtgtgactagtgaagactccaaatcaagacatagtcagaaagaggcctctgcctctcca
ggcgtgtctccaccgctttcttcctctccctcaaacctcccgttcgtttcttcattatcg
gtacactcttcaaagtcctcaccctctgcatctccccagcctgctgtcacgcattccccc
cctctctcctcaaaactctctccccgactggagtctaggtctccgaaattgaagcctgct
ttaaaatgtgatgttgtagttgttggtaaacctcctcgtagcccagtgatgtccaggaga
tcctgcggctcaccagttagaggtcaaagcttttcaccgtctcacaggccacaactgcca
gtcttagttcaagacaacttgcaaagtgggggagaaccgaatgaagatgagttagaactc
aacgaaggggatgttattgatgtcatggaaaagtgtgacgatgggtggtttgttggaact
tctagaagaaacaagttgtttggtaccttccccggaaactatgtcaaacggttataa
DBGET
integrated database retrieval system
