Polyodon spathula (Mississippi paddlefish): 121297742
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Entry
121297742 CDS
T07273
Name
(RefSeq) ras-related protein Rab-22A-like
KO
K07891
Ras-related protein Rab-22
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121297742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121297742
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pspa04031
]
121297742
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
121297742
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121297742
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Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
SpoIVA_ATPase
AAA_7
AAA_16
AAA_24
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
121297742
NCBI-ProteinID:
XP_041080140
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All DBs
Position
23:27116251..27128022
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AA seq
194 aa
AA seq
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MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQSELHKFLIWD
TAGQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAVAGNKC
DIADAREVLEKDAKDYADSIHAIFVETSAKNGININELFLEISQRIPSAVSSAGAGGKGF
KLRRQPSETKRRCC
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcgcgagttgaaggtttgtctgcttggggacactggggttggtaaatcaagt
attgtttggagatttgtggaagatagctttgatcctaatatcaatccaactattggggca
tcctttatgacgaaaactgtgcagtaccagagtgagctacacaagttcctcatctgggac
acagccgggcaggagcggttccgggctttggcaccaatgtattacagaggatctgctgct
gctatcattgtgtatgacatcacaaaagaggagtctttccagacactgaagaactgggtg
aaagaactgagacagcatgggcctcccaatatcgttgttgcagtcgcaggaaacaaatgt
gacattgccgatgcaagggaagtgcttgaaaaggatgccaaggactacgcagattccatc
catgctatctttgtggaaacaagtgccaaaaacggcattaacattaatgagctcttccta
gaaataagtcagaggattccatctgctgtttccagtgctggagcaggaggcaagggattc
aaacttaggaggcaaccatccgagaccaagcgcagatgctgctga
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