Polyodon spathula (Mississippi paddlefish): 121297797
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Entry
121297797 CDS
T07273
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X1
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121297797
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_5
LRR_1
V-set
LRR_9
C2-set_2
Ig_5
LRRNT
LRRCT
Receptor_2B4
TMEM154
Motif
Other DBs
NCBI-GeneID:
121297797
NCBI-ProteinID:
XP_041080235
LinkDB
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Position
23:complement(6806356..6853715)
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AA seq
1080 aa
AA seq
DB search
MAASLGQIGLLPYYFPYLICILQLLISSGFSIELQCPLNCTCTGNLVDCSNLGLTNTPLD
LPPWTSYLNLSFNKLTAIDQAALSELPNLRELRLGHNELTDIPSIGASSSNIVSLYLHHN
RIRSIESSQLKPFVSLETLDLTSNEITEIRSTCFPSGLQLKDIYLGSNKIGLLEPGAFDS
LSHSLQVLRLSRNRISQLPVKAFKLPWLTQLELNRNRIRLIEGLTFQGLDRLEVLKLQRN
NINKLTDGAFWGLAKMQVLHLDYNSLTEVNSGSLYGLSSLHQLYLGNNSISRINPDGWMF
CQKLHELVLSYNNLTRLNEGSLAGLGGLYTLRLSHNSISHLSEGAFRGLKALRSLELDHN
EISGTIEDTNGVFSSLGSLNKLTLFGNKIKSVAKKAFSGLEALEHLNLGNNAIRSIQPDA
FAKMKSLKELLINSDSFLCDCQLKWLPQWLSGKKFKSSVTASCSHPESLQSRSIFSVPAD
SFVCDDVPKPQITLQPETTMGVLGKDIRFTCTAASSSTSPMSFAWRKDQELLRDADMENF
AHVRAKDGEVMEYTTILHLRHVTFAHEGRYQCIITNHFGSTYSNKARLTVNVLPSFIKMP
QDITIRTGTTARLECAAEGHPSPTIAWQKDGGTDFPAARERRMHVMPDDDVFFIMNVKIE
DMGVYSCTAQNVAGTLSANATLSVLETPYLVQPLEDHTVAVGETVALQCKALGSPLPRIS
WLKGDEPLQLTDRHHFTPGNQLLIIRNAEQEDAGKYTCVMSNTLGTERAHSQLSVQRASG
CVVSRKDGTMTVGIIIIAVVCSIVITSLVWVCIIYQTRKKSEEYSVTNTDETIVPPDVPS
YLSSQGTLSDRQEVCISVEASKGPQPNGHIESNGICQSDAGGCEHMETHVACRRKEDDTA
RPENTAGYGVQVICSDCLNNTNTYSKNQECYSQNFRAEDHSHQQALSSTGSCRADLEDSG
PENHQHYNGTVSSLEREGPMYPSNHDRMTPQTQKGPSLKHFDINGSHSQPMEISGPLGTF
CPPSLEGSFHEPIKLTGLPQTSLDNKCEAKARQALPHNGHLPVLCDSIISESTPLRRASD
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcgttgggacaaattggattgctgccttattattttccgtatttaatttgt
attctgcaactgcttatttcctccgggttcagcatagaattgcagtgtcctctgaattgt
acatgcactggaaacctggtagactgtagcaatttgggactgacgaatactccattggat
ctcccaccctggacttcctatctaaacctgagcttcaacaagctgacagcgatcgatcag
gccgccctctctgagctgccgaacctgcgggagttgcgtcttggtcacaatgagctgaca
gacatcccttcaataggagccagttcttcgaacattgtctctctttatctgcatcacaat
aggattcgcagtatagagtcaagccagctaaagcctttcgtctccttggaaaccttggat
ctaacttccaatgagatcactgaaatacggagcacctgttttccatcgggactgcaactc
aaagacatatatctgggcagtaacaaaataggtctcctggagcccggtgctttcgatagc
ctgtcacattccctgcaagtacttcgtttgagcagaaacaggatttcccaacttcctgtc
aaagcgttcaagttaccctggctaacacaattagagttgaaccggaacagaatccgcttg
attgagggcctgactttccaaggattggaccgtttagaagtgctgaagctacagaggaac
aacataaacaagctgaccgacggggccttctgggggctggctaaaatgcaagtgctccac
ctcgactacaacagtctgactgaagtgaacagtggctcactgtatgggctgtcctctctc
catcagctgtacctaggcaacaactccatatcgcgtatcaatcctgatggctggatgttc
tgccagaaactgcatgagctggttctgtcctacaacaacctgacgcggctgaacgagggc
agcctggctggcctgggggggctgtacaccctccgactgagtcacaactccatcagccac
ctctccgagggagctttccggggactcaaggccttgcgctcactggagctggaccataat
gagatctctgggacaatagaagacaccaatggggtcttctcaagcctgggcagcctgaac
aagctaactctgtttggaaacaagatcaagtcagtggccaagaaagcgttctcaggctta
gaggccctcgagcacctgaatttgggaaacaatgcaatccgctccatccagcctgatgcc
tttgctaaaatgaagagcttaaaggaactacttatcaacagtgacagtttcctttgtgat
tgccagctgaaatggttaccccagtggctcagcgggaagaaatttaagtccagtgtcacg
gcctcgtgttcccacccagagtcattacaaagcagaagcattttcagtgtccctgcagac
agctttgtgtgtgatgatgtcccgaagccacagatcacgctccagcccgagaccacaatg
ggagtgctggggaaagacatccgttttacctgcacggcagccagcagcagcacctctcca
atgagttttgcttggcgcaaagaccaggagctcctgcgcgacgcggacatggagaacttt
gctcacgtgcgggccaaggatggcgaggtgatggagtacaccaccatcctgcacctgcgt
catgtaaccttcgcacacgagggccgctaccagtgtatcatcaccaaccactttggatcc
acctactcgaacaaggcgcgtctcactgtcaatgtccttccctcctttatcaagatgcca
caagacatcacaatccgcactggcaccacggcccgcctagagtgtgctgcagaggggcac
ccctctcccaccattgcctggcagaaagacgggggcacagacttcccagccgcgcgggag
cggcgtatgcatgtgatgcccgatgacgacgtcttctttatcatgaacgtgaagattgag
gatatgggcgtctacagctgtacagcgcagaacgtagctggtaccctctccgccaatgcc
actctgtccgtgctggagacaccttacttggttcagccgctggaagatcacactgtggca
gtgggggagacggtggcactgcagtgcaaagcgttgggcagtcccctccccaggatcagc
tggctgaagggggacgagcccctgcaactgacggatcgccaccactttactcctggcaac
cagctgctcataatccgcaacgcggagcaggaagatgctggcaagtacacctgcgtcatg
tccaacaccctggggaccgagcgagctcacagccagctgagtgttcagcgggcaagcggc
tgtgtggtcagcaggaaggatggcaccatgactgtgggcatcatcatcatcgctgtggtt
tgcagcatcgtcatcacctcgctggtctgggtctgcatcatctaccagacaaggaagaag
agtgaagaatacagcgtcacgaatacagatgaaaccattgtccctccagatgtcccaagt
tacctgtcttctcaaggaactctgtccgatcgacaggaagtgtgcattagcgtggaagcc
agcaaaggtcctcagcccaatggacacattgagagcaatggtatttgccagagtgatgca
ggaggatgtgaacacatggaaacccacgtggcgtgtagaagaaaagaagacgacacagca
aggccagaaaacacagctgggtatggagtgcaagtgatctgcagcgattgtttgaataat
accaacacttactccaaaaatcaagaatgttattctcagaacttcagagcagaggatcac
tctcatcagcaagcacttagcagcacaggatcatgcagggctgacctggaagattcaggc
cctgagaatcaccagcactacaatgggactgtcagtagtttggaaagagaaggccctatg
tatcctagcaaccatgacaggatgacgccacaaacacagaaaggaccatcactgaaacat
tttgacataaatggttcccattcacaacctatggaaatttcaggaccacttggtactttc
tgccctccatctttagaaggttcattccacgaaccaattaaattaactggtcttcctcag
acgtcattggacaataaatgtgaggccaaagccagacaggcattgcctcataatggacac
ctacccgtgctctgtgactctattattagtgagagtactccattgaggagagccagtgat
tga
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