Polyodon spathula (Mississippi paddlefish): 121297856
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Entry
121297856 CDS
T07273
Symbol
arih2
Name
(RefSeq) E3 ubiquitin-protein ligase ARIH2 isoform X1
KO
K11969
ariadne-2 [EC:
2.3.2.31
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121297856 (arih2)
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121297856 (arih2)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121297856 (arih2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ariadne
IBR_2
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
DUF4637
Motif
Other DBs
NCBI-GeneID:
121297856
NCBI-ProteinID:
XP_041080329
LinkDB
All DBs
Position
23:complement(202246..226938)
Genome browser
AA seq
507 aa
AA seq
DB search
MSVDMNSQGSESNEDFDGNSEEEEEEDLGDIADYYEGVAGDMEQQGADAFDPEEYLFTCL
TYRESQRVLSEQVNSMASALKVLPSVAKLVLVHFHWQLTDILERHKSNSTQLLLDAQVQA
APCNPVSAHAAPPHSSLHCGVCLQLVRKESLLSLPCQHPFCKSCWEQHSTVLVKDGVGVG
ISCMARGCPLRMPEDFVLPLLPSEELREKYRRYLFRDSVESHYQLQLCPGADCPIVIQVQ
EPRARRVQCSRCSEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKC
NICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQARE
ALKKYLFYFERWENHNKSMQLEAQTYQRIQEKIQERVMNNLGTWIDWQYLQNAAKLLAKC
RYTLQYTYPYAYYMESGSRKKLFEYQQAQLEAEIENLSWKVERADSYERGVSLTEGELSS
YDRGDLENQMHIAEQRRRTLLKDFHDT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtggacatgaacagccagggctccgagagtaacgaggacttcgatggcaattct
gaggaggaggaggaggaggacctgggggacatcgctgattattacgagggcgtcgcagga
gacatggagcagcagggggctgacgccttcgaccccgaggagtacctgttcacctgcctc
acctaccgggagagccagagagtgctgagtgagcaggtgaacagcatggcctccgcactc
aaggtcctgccttcagtagctaaactggtcctagtgcatttccactggcagctgactgat
atcctggagaggcacaagtccaattccacacagctgctgctggatgcacaggtgcaggct
gccccctgtaaccctgtaagtgcgcacgctgcgccccctcactcctctctgcactgcgga
gtctgcctgcagctcgtcaggaaggagagcctgctctccctgccctgccagcaccccttc
tgcaagagctgctgggagcagcactccactgtgctggtcaaggacggggtgggagtcgga
atctcctgcatggctcgggggtgcccgctgcgcatgccagaggacttcgtgctcccgctg
ctgccgagcgaagagctgagagagaaataccggcgctacctcttcagggactccgtggag
agtcactaccagctgcagctgtgtccgggagcagactgccccatcgtgatccaggtgcag
gagccacgggctcgcagagtgcagtgcagccgctgcagtgaggtcttctgcttcaagtgt
cgtcagatgtaccacgcccccacggactgtgcaaccatcaggaagtggctgacgaaatgt
gccgacgactctgagacagccaactacatcagcgcacacactaaagactgccccaagtgc
aatatctgcattgagaagaatggcggctgcaatcacatgcaatgctccaaatgcaaacac
gatttctgctggatgtgcctgggcgactggaagactcacggcagcgagtattatgaatgc
agccgctacaaagagaaccctgacattgtgaaccagagccagcaggcgcaggcccgcgag
gcgctcaagaaatacctcttctactttgagaggtgggaaaatcacaacaagagcatgcag
ctggaggcacagacctaccagaggatccaggagaagatccaggagagagtcatgaacaac
ctgggcacctggatcgactggcagtacctgcagaatgcagccaagctgctggccaagtgc
cgctacacgctgcagtacacctatccctacgcttactacatggagtccggctcccgtaag
aagctgtttgagtaccagcaggcacagctggaggcggagattgagaatctatcctggaag
gtggagcgagccgacagctatgagcgcggagtgagcctcaccgagggggagctgtccagc
tacgacaggggggatttagagaatcagatgcacatcgcagagcagaggagacggacgctg
ctcaaagacttccatgacacctga
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integrated database retrieval system
