Polyodon spathula (Mississippi paddlefish): 121297870
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Entry
121297870 CDS
T07273
Name
(RefSeq) zinc finger protein 217-like
KO
K27275
zinc finger protein 217
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121297870
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
121297870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_16
zf-H2C2_5
zf-C2H2_6
Zn_SUZ12
zf-C2H2_2
zf-C2H2_3rep
zf-C2H2_7th_ZNF462
zf-C2H2_ZNF462_1st
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
121297870
NCBI-ProteinID:
XP_041080381
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Position
23:complement(20068926..20082606)
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AA seq
1021 aa
AA seq
DB search
MPTHPLLAYMASPDGLGHDIVNNTNANMPGAGSSMTPHTSIQDKGLSQAEGCMPLDCMFC
EQTFKHQEELGRHVQTQHRTTLCEPAVLCVEAAFLAPNEKGRIKATSVLHGDKVSKEEEE
EFSCEVCWQAAEDATDLENHMKKHKDSFTYGCNVCGRRFKEPWFLKNHMRTHTGKPGAKN
KPQADTEVSATINEVVQDQITGNVISPYKMCMVCGFLFSSKDILMEHSRVHNPDSETNDE
EKKPVEEQPVTGSPVSQESFLQLLNLRPHTSKTSTKAEKSAKWIEQLDPFNTYQAWQLAT
KGKIAVGPGQTKEPGHEISTDNEDSCSDKEELHEIWSTGRSYNPVNEGLICKLKSKSANG
DTPSPDMDHKSLQSKEKPTQCGDCGKTFRTYHQLVLHSRIHKKERNGAESPISIDGKQLS
TGSMESGILDRTEECSEDGSEEGVHGDIFHSDKSEDGSEKGKSKSLGSSKECSYCGKTFR
SNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHKDKHSEAELAGKPLSASPA
PEEALPSKDKSAQELACTKGASKHLDTDQNAKQRKQLWSSPTSSMVLNSASRVGLKSEHL
DKTTVIKKSCQAAQNTVVKSETESLVSSDSLGLGSGAHDISDSASLKLKLERKEIKEDSS
FEKPLNLSFKMSLSVSSTSDPNSALTTSTCPFCTYKTLYPEVLLMHQKLVHKYKPDVLST
HGLKSTAALKQKRYTGCPPALEGKDVSPLPLFHRSHPRRTKSPPHQQAKPLSKINPTKNT
LPAVQAPEVESRKVAQNRRGDPQQNPCRLNQTEVGQGTSEAHPKRDGDVALSIRPNFLGS
EGLVHRGRQIRNGDLWPGDSVRVSLSNGNGNPVHLDFGEPSNKRCKSSSSASHEQAISES
SFRRGDNHGRLFVPGRNMVTSKESSPTTAARSFSPVKMSPSVPANGEGPEWNVLNILRTY
NPHDLASLYNSGGTGTSQGSVSVVEGNRSLLYQHYPSSMLQRRNYPSPRSNARSGPTDKN
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgccaacccatcctttattagcatacatggcaagtccagatgggctaggccatgacata
gtgaataatactaatgctaacatgccaggtgctggctccagcatgacaccacacacaagt
attcaagacaagggtttgtctcaggctgaaggatgtatgcctttggactgtatgttttgt
gagcagacctttaaacaccaagaggagcttgggcgtcacgtccagacccaacacagaaca
acattgtgcgagcctgccgttctgtgcgtggaagcagcgtttttagctccaaacgagaaa
ggcagaataaaagccacttctgtgctgcatggagataaagtcagtaaagaagaggaggag
gagtttagttgtgaagtttgttggcaggccgctgaggacgccacagatctggaaaatcat
atgaagaagcacaaagactcgttcacttatggttgtaatgtttgtggaagacgatttaag
gagccctggtttctgaaaaatcacatgaggacgcacacagggaagccaggagcaaaaaac
aagcctcaggctgacacagaagtctctgcgactatcaacgaggtcgttcaagaccaaatt
actgggaatgtcatttctccctacaaaatgtgcatggtgtgcgggttcctgttctcaagt
aaagacattttaatggagcacagtagagttcacaaccctgactccgagaccaatgatgag
gaaaagaaacctgtagaggaacagcctgttactggatcacctgtatcccaagagtccttt
cttcagctgcttaacttgcgcccgcacacctccaaaaccagcacgaaagccgaaaagtct
gcaaaatggatcgagcagcttgacccttttaatacttaccaggcttggcagctagccaca
aaaggcaaaattgctgtcgggccggggcagaccaaagaacccggtcacgagatcagcact
gacaatgaagattcctgctcagataaagaagaactccatgaaatatggtccaccggtaga
agttacaatccagttaatgagggcttaatttgtaaactgaaatctaaaagtgccaatggg
gacaccccttccccagatatggatcacaagtctctacagagcaaggaaaagccaactcaa
tgtggggattgtgggaagacctttagaacctaccaccagctggtgctccactccagaata
cacaagaaggaaaggaacggtgctgagagtcctatctccattgatggcaagcagttaagt
actggatctatggaaagtggcatattggaccgaactgaagaatgttctgaagatggctca
gaagagggagtacacggtgatatatttcattcagataaaagtgaagatggctctgagaaa
ggaaagagcaaaagtcttggctcctccaaagagtgcagttactgtggaaagactttccgc
tcaaattattacctcaacattcatctcaggacacacacaggtgaaaaaccgtacaaatgt
gaattctgtgagtatgctgcagctcagaagacatcgttaagatatcacttggagagacac
cacaaagacaaacattctgaagctgaacttgctggtaaacctttatcggcatcacctgct
cctgaagaagccttaccaagcaaggataaatctgctcaggaattagcttgcacaaaaggt
gcgtctaaacaccttgatactgaccaaaatgcaaaacaacgcaaacaattgtggtcttca
cccacatccagcatggtgcttaacagtgcttcacgtgttggcttgaaaagtgagcatctg
gacaaaaccacagtgatcaagaaatcctgccaggctgcccagaacaccgtagtaaaatca
gaaacagaaagtcttgtgtccagtgattctttagggttgggaagtggggcccatgacatc
agtgattcagcgtcactcaaactgaagttggaacgaaaagaaataaaagaggactcctca
tttgagaaaccattaaatttgtcctttaaaatgtctctttctgtttcctctacctcggat
cctaatagtgctttaacaactagtacctgccctttttgtacttataaaactctataccct
gaagtccttttgatgcaccagaagttggtgcataaatacaagcctgatgttctcagcaca
catgggttaaaaagtactgctgccctcaaacaaaaaagatacactggatgcccccctgcc
cttgagggaaaagatgtttcccccttgcctttgtttcacagaagccaccctcggcgaacc
aagtctccacctcaccagcaagcaaagccccttagcaaaataaacccaactaagaatact
ctgcctgctgtgcaagctcctgaagtagaatcaagaaaagtagctcagaacaggaggggg
gacccgcagcaaaatccctgtcggctaaatcaaactgaagttggacaaggcacttctgaa
gctcatcccaaaagggatggagatgtcgctctgtccataagacccaattttttaggcagc
gaagggcttgtgcacagaggtcgtcagattagaaatggagatctgtggccaggtgattct
gtaagggtaagcctttccaatgggaatggaaacccagtgcatttggactttggagagccc
tccaataagagatgcaagtcttccagttcggcaagccatgagcaagccatttctgagagt
agtttcaggagaggtgacaaccacggcaggctgtttgttccagggagaaacatggtgacg
tctaaggaaagctcacccaccacagcagcacgttccttttctccagtgaaaatgtcgccc
tctgtacctgcaaatggagagggtccagaatggaatgtattgaatattctccggacctac
aacccccatgaccttgcttcattgtacaattctggtggcacgggcacgagccaaggatct
gtttcagttgtagaagggaataggtctttactctatcagcattacccaagtagcatgctg
caaaggaggaactatccaagccctaggagtaatgcacgttctggacccactgataagaat
gcttaa
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