Polyodon spathula (Mississippi paddlefish): 121297874
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Entry
121297874 CDS
T07273
Name
(RefSeq) semaphorin-3F-like isoform X1
KO
K06840
semaphorin 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
Ig_3
Ig_6
I-set
PSI
Ig_2
V-set
DUF865
Motif
Other DBs
NCBI-GeneID:
121297874
NCBI-ProteinID:
XP_041080396
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Position
23:9729497..9806027
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AA seq
805 aa
AA seq
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MAIHSLCMVTHLLALSHWMLVSSCLPLSAPRVQLTFKELKTTGTSHHFSFLLNTTDYRIL
RMDEDHDRMYVGSKDYILSLDLHDINKEPLIIHWPVSEQRRDECVLSGKDTNGECGNFIR
LIEPWNRTHLYVCGTGAYNPICTYINRGRKPLAPLHLQMPQPGGRASRAADITSPSMPND
HKEYIFHLEPGKVDSGKGKCSYDPKFNSVSALINGELYAGVYIDFMGTDAAIFRTMGTQT
AMRTDQYNSRWLNDPAFIHAQLIPDSAEKNDDKLYFFFREKSSDAGQSPVAHSRIGRICL
NDDGGHCCLVNKWSSFLKARLICSVSGPDGIETHFDELQDVYIQQTQDIKNPVIYAVFSA
SGSVFKGSAVCVYSMADIRMVFNGPFAHKEGPNYQWVPYSGKIPYPRPGTCPGGTFTPNM
KSTKDYPDEVINFMRNHPTMYNAVYPVHRRPLVVRTNVNYEFTTITVDQVDAADGRYEVL
FLGTDIGTVQKVIILPKDDMETEELILEEVEVFKVPIPITTMKLSSKRQQLYVASAVGVT
HLALHRCDVYGEACADCCLARDPYCAWDGKFCSRYSASSKRRSRRQDVKHGNPIRQCRGY
NSNTSKNTLEMVQYGVEGSSAFLECQPRSPQASIKWHLQKENSDRKKEMRSDDRILKTEQ
GLLLRFLQPSDSGFYLCTATENNFKHMLVRLQLVVLSRRAVNAVLAESGSLSAAVLQASP
RSPSLNPSSPRTPSPGQYKDLLQILSQPEMGLINQYCEDYWQLAGAGPKEPLMGALKGKD
LKELKEQKKPRNRRNHQGQDGGQQT
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggccattcacagcctctgcatggtgacccatctcctggcactcagtcactggatgctg
gtgtccagctgtcttccgttgtcggccccaagagtacagctgaccttcaaagagctgaag
accactggcacatcccaccacttctcgttcctgttgaacacgacagactaccggatcctg
cggatggatgaagatcatgatcggatgtacgtcgggagcaaagattacatcctgtctttg
gaccttcatgatatcaacaaggagccacttataatccactggccagtttctgagcaaaga
agggacgagtgtgttttatctgggaaagacacaaatggggagtgtgggaactttatccgc
ctgattgagccatggaaccgaacccacctatatgtctgtggaaccggggcctacaatccc
atatgcacctacatcaaccgaggacgtaagcctctggcccccctgcacctgcagatgccc
caaccaggagggagggccagcagagccgcagacatcacctcaccctccatgccgaatgat
cacaaggaatacatcttccacctggagcctggcaaagtggattctggtaaaggcaaatgc
tcgtatgaccccaaattcaacagcgtctcagccttgataaatggcgagctctatgcgggt
gtttatatcgacttcatgggaacggatgcagccattttccgcacaatggggacgcagacg
gccatgcgcacagaccagtacaactctcgctggctcaatgaccctgcatttatacatgcc
cagctgatcccagacagtgcagagaagaatgatgataaactctactttttcttccgggag
aagtcatcagatgcgggacaaagccccgtggcgcactcacgaattggcaggatctgtctg
aatgatgatggcggacattgctgtctagtgaacaaatggagttccttcctcaaggctagg
ctgatctgctcagtttcagggcctgacggaattgaaacacacttcgacgagctccaggat
gtttatatacagcagacacaggacatcaaaaaccctgtcatatacgctgtcttctctgca
tcaggatctgtgtttaaagggtcagcggtgtgtgtctactccatggctgacatccgaatg
gtgttcaacggaccctttgctcataaggagggacccaactaccagtgggtaccttacagc
ggcaagattccctacccccgccctggcacgtgccctggaggtaccttcacccccaacatg
aaatccaccaaagattaccctgacgaggtaattaacttcatgcggaaccaccccaccatg
tacaacgctgtctacccagtgcacaggcgccccctagtggtgcgaaccaatgtcaactac
gagtttaccactataactgtagaccaggtggatgcagcagatgggcgctatgaggtcctc
ttcctggggacagatatcgggacagtgcagaaggtgattattctcccaaaggatgatatg
gaaacagaggaactaatcctggaagaggtggaagttttcaaggttcctattccgattaca
acgatgaagctttcctcaaaacggcaacagctgtatgtggcctcagcagtgggagtcact
cacctggccctccatcgctgcgatgtgtacggggaggcctgtgctgactgctgcctggcc
agagacccctactgcgcctgggacggcaagttctgctcccgctactcagcctcgtccaag
aggcgcagcagaagacaagatgtgaaacacggcaatcccatcaggcaatgcagaggctac
aactccaacaccagtaagaacacactggagatggtgcagtatggagtagagggcagcagt
gccttcctcgagtgccagcccaggtctccacaagcatctatcaagtggcacctgcaaaaa
gaaaacagcgacagaaagaaagagatgcgctcggatgatcgcattctgaagacggagcag
ggcttgctgctgcgctttctgcagccctcggactctggattctacttgtgcaccgccacc
gagaacaacttcaaacacatgctggtgcggctgcagcttgtggtgctatccagaagagcg
gtcaatgccgtgctagccgagtcgggatccctgtcagccgctgttctgcaggccagcccc
cgatccccaagcctgaacccctccagcccccgaacccccagccccggacagtacaaggac
ctgctgcagatcctgagccagccagagatggggctcatcaaccagtactgcgaggactac
tggcagctggcaggggctggccccaaagagccattgatgggcgctctgaaagggaaagac
ctcaaagaactcaaagagcaaaagaaaccacggaaccgccgaaatcaccagggccaggac
gggggacagcaaacatga
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