Polyodon spathula (Mississippi paddlefish): 121297886
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Entry
121297886 CDS
T07273
Name
(RefSeq) leiomodin-3-like isoform X1
KO
K22030
leiomodin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121297886
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121297886
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121297886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
LRR_6
Motif
Other DBs
NCBI-GeneID:
121297886
NCBI-ProteinID:
XP_041080416
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Position
23:complement(7315498..7320243)
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AA seq
584 aa
AA seq
DB search
MSDYSQNSDQESYSEDIDEDEILANLSPEELKQLQSEMDNLAPDEEVPVGMRQKDQTEKP
PTGSFDHRSLVNYIYWEKESKRMLEEERLPTVLLPSERDTRKDFDKDEDLKEEVGGEEGE
KEIEEEKEDEKERELQEVQALPKCSEETGEISLSISDKKQEEDTNRVDEATKEPEPENEK
QRQNSDEKRKAETSYREQVIDNCNSETPVRDTRVHETNTAETNELVENQEKEEKKISKLQ
KPKKLTLGDSLIKLTARPSGNETNLDTTLNKIKQNNPEIKEINLNNIENIPKEMLIDYVN
ALKKNKHVTKFSITNTGADENVAYALASMLRENRSITTLNIESNFITGKGIIAIMRCLQF
NETLTELRFHNQRHMLGHHAEMEVSRLLKANNTLLKMGYHFELPGPRMVVTNLLTRNLDK
QRQKRMEEQKQQQAKDQEQMMARFKNSLNLPPGLWEMLGDYLPAMPNTQPYPPQAPSPPL
QLKKKPVPFPPIQENEQPNLLKDIKLKKAPKNRAADSTLEQKEKANLKDVIKTLKPVPRR
RQAPKVDLTPREVLLNEIRTSNVAYLKAVSITNNVQIATEMNDL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactacagtcaaaactctgaccaagagtcctatagcgaggacattgacgaagat
gagatcctcgcaaacctgtcacctgaagaactgaagcagcttcagagtgaaatggacaat
cttgccccagatgaggaggtgccagttggaatgagacagaaagaccagacagagaagcct
ccaacaggatcattcgatcacaggtctttggttaattatatctattgggagaaggaatcc
aagcgaatgctggaggaagaaagacttcccacagttcttttacctagtgagcgagataca
agaaaagactttgacaaagatgaagatctgaaagaagaagtaggaggagaggaaggagag
aaagaaatagaagaagaaaaggaagatgagaaagaaagagaacttcaagaggtccaagcc
ttgccaaaatgctctgaagaaacaggagaaatttctctcagcatttctgataaaaaacaa
gaggaagatacaaacagagtggacgaggctaccaaagaaccagaaccagagaatgaaaag
caaaggcaaaattcagatgagaaacgcaaggcagagacatcttacagagaacaagtcata
gacaactgcaactcagagacccctgtcagggacacacgagtacatgaaaccaatactgca
gagacaaatgagcttgtagaaaaccaggaaaaagaagagaagaaaatatccaaactccaa
aaaccaaagaaactaactttaggtgatagcttaatcaagttaacagcaaggccttcagga
aacgaaaccaatttagatacaaccttgaacaagattaaacagaacaatcctgaaatcaaa
gaaattaatttgaataacattgaaaacattcctaaggaaatgctgatagattatgtgaac
gccttgaagaagaacaagcatgtgacaaaattcagcattaccaacactggagcagatgaa
aatgtggcgtatgccttggccagcatgctccgtgaaaatagaagcatcaccactctgaat
atcgagtcgaacttcatcacaggtaagggaattatagctatcatgaggtgtctgcagttt
aacgagacgctcactgaattgaggttccacaatcaaagacacatgctgggtcatcatgct
gaaatggaggtatccagactcctaaaggcaaacaacactttgttgaagatgggatatcat
tttgagcttcctggtccaaggatggtggtcactaacttactgaccaggaaccttgacaag
cagcgacaaaaaagaatggaagaacaaaagcagcaacaagccaaagaccaggagcagatg
atggctaggtttaagaacagtctaaatcttcctccaggtctgtgggagatgttgggtgac
tacctgcctgcaatgccgaatacgcagccttacccaccgcaagcaccaagtcctccgctc
cagctcaagaaaaaacctgttccgttccctccgatacaggagaatgagcagccaaatctg
ctgaaggatattaaactcaagaaggcaccaaagaacagggctgcagacagtacattagag
cagaaggagaaagctaacctcaaagacgtgattaagactctaaagccagttcccagaagg
cgacaggcacccaaggttgacttgacgcccagggaggttctacttaatgaaattcgcaca
agcaatgttgcttatctcaaagcagtgagtattaccaacaatgtacaaattgccacagaa
atgaatgacttataa
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