Polyodon spathula (Mississippi paddlefish): 121297935
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Entry
121297935 CDS
T07273
Name
(RefSeq) mRNA export factor-like
KO
K14298
mRNA export factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121297935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121297935
03036 Chromosome and associated proteins [BR:
pspa03036
]
121297935
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121297935
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121297935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
121297935
NCBI-ProteinID:
XP_041080505
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All DBs
Position
23:complement(25739732..25744315)
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AA seq
407 aa
AA seq
DB search
MEIHMMETKAKCNTKLLSLTALAPDYLTPATESQRLTRLSMFGTNAGFGSGGASMFGNTT
TDNHNPMKDFEVTSPPDDSISCLAFSPPAMTGNFLIGGSWANDVRCWEVQDSGQTVPKAQ
QMHTGPVLDVCWSDDGSKVFTASCDKTAKVWDLNSNQAMQIAQHDAPIRSIHWIKAPNYS
CVMTGSWDKTLKFWDTRSPNPMMSLQLPERSYCADVVYPMAVVASAERGLIIYQLENQPS
EFRRIDSPLKHQHRCIAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS
NGTNTSAPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACC
FNSNGNIFAYACSYDWSKGHEYYNPQKKNYIFLRNAAEELKPRNKKW
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagatccacatgatggagaccaaggcgaaatgtaacacgaagctcctgtctctgaca
gccttagcgccagactacctcacaccagccaccgaatcgcagagactaactaggctgagt
atgtttggaacaaatgccggctttggatcaggaggcgccagcatgtttggaaacaccacc
acagacaaccacaacccaatgaaggattttgaggtgacatctccccctgatgacagtatc
agctgtctggccttcagcccccctgccatgacagggaacttcctgattggggggtcctgg
gccaacgatgtgcgctgttgggaggtacaggatagtgggcagactgtacccaaggcacag
cagatgcacacagggccggtgctagatgtctgttggagtgacgatggaagcaaagttttt
acagcatcatgtgacaaaactgctaaagtgtgggatcttaacagcaaccaggcaatgcag
atagcccagcatgacgcacctattaggagtatccactggataaaagctccgaactacagc
tgtgtcatgacaggaagctgggacaagactttgaagttctgggacacgcgttccccgaac
ccaatgatgtctcttcagctgccagaaaggtcctattgtgctgacgtggtgtaccccatg
gcagttgtcgccagtgcagagagggggctgattatctaccagctagagaaccagccctca
gagtttcgcaggatagattctcccctaaaacaccagcatcgatgcattgccatctttaag
gacaagcagaacaaaccaacagggttcgccttggggagcattgaagggagggttgccatt
cactatatcaacccacccaacccagctaaggataacttcacctttaagtgccacagatcc
aatggaaccaacacctctgcaccgcaggatatttacgctgttaacgcaatctccttccac
ccagtccacgggactctggctacggtgggctctgacggacggttcagtttctgggacaaa
gacgcgcgcaccaaactgaaaacatccgagcagctggaccagccaatcacagcctgctgc
ttcaacagcaacggaaacatctttgcctacgcgtgcagctatgactggtcaaagggacat
gagtactacaatcctcagaaaaagaactatatcttccttcgcaatgcagccgaggaactg
aaacccaggaacaagaaatggtga
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