Polyodon spathula (Mississippi paddlefish): 121297981
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Entry
121297981 CDS
T07273
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
pspa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121297981
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121297981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121297981
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121297981
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121297981
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
121297981
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121297981
NCBI-ProteinID:
XP_041080579
LinkDB
All DBs
Position
23:complement(4433833..4459389)
Genome browser
AA seq
499 aa
AA seq
DB search
MQHCHYTVSNPYLSLTGTAMVDTQLPMWQVSFGLNPVDMAELDDHSHSFDIKPYTTVDYS
GISNRSYDFSPPERADLTELDCKYDFKLQEYHHTSTIKLEPPSPPQYSDKSFPFTKLHED
PLNSTLSVECRVCADKASGFHYGVHACEGCKGFFRRTIRLKLVYDRCDLNCRVHKKSRNK
CQYCRFQKCLMVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQMNPESADLRVLAKHLYDS
YFKSFPLTKAKARAILTGKTGDKAPFVIHDMNSLKAGEHYISFKQPPVPDQGQQQNKDME
IRLFQSCQFRSVEAVREITEFAKSIPGFLNLDLNDQVTLLKYGVHEVIFSMLASLLNKDG
ALVSCGQGFMTREFLKSLRKPFCELMEPKFDFSVKFNALELDDSDLAVFISVIILSGDRP
GLVNVKPIEDLQDNMLQALELQLKMNHPDSPQLFAKLLQKMTDLRQVVTEHVQLLQLLKK
TELDMDIHPLLQEIIKDLY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcagcattgtcattacactgtcagcaatccatatctttcattaaccggaacagccatg
gtagatacacagctgccaatgtggcaagtgagctttgggctgaatccagtggatatggca
gagctggatgaccactcccactcttttgacatcaagccctacacgacagtggattattcc
ggcatttccaaccggtcttacgacttcagcccgcccgagagagccgacctgacagagcta
gactgcaaatacgattttaaattacaagaataccatcatacaagcacgataaaacttgaa
ccaccatctccacctcagtactcagacaaaagctttccatttacaaaactgcatgaggac
cctttgaactccacactgtccgtagagtgcagagtctgtgcggacaaggcctcaggattt
cactacggagtccatgcatgtgaaggatgcaagggcttcttccgcagaacaatcaggttg
aagttggtatatgacagatgtgacctaaactgtcgcgttcacaagaagagcagaaacaaa
tgtcagtactgcaggttccagaagtgtctcatggtgggcatgtcgcacaacgccatacga
tttggccgaatgccccaggctgaaaaagagaagcttttggcagagatctccagcgatatt
gaccagatgaatcccgagtctgctgatctcagagtccttgccaagcacttgtatgactca
tatttcaagtcctttcctctcaccaaagccaaggcgagggccatcttgacgggaaagaca
ggagataaagccccttttgtgattcacgatatgaactctttgaaggctggagagcattac
atcagcttcaagcagcctcctgttccagatcaggggcagcaacagaacaaggacatggag
atccggcttttccaaagctgtcagttccgctccgtagaggcagtccgggaaatcactgag
tttgccaagagcatcccgggcttcctcaacctggatctcaacgaccaggtgactctcctc
aagtacggcgtccacgaggtgatcttcagcatgctggcctctctcctgaacaaggacggg
gccctggtctcctgcggacagggcttcatgacccgagagttcctcaagagtctacgcaag
cccttctgtgagctgatggagcccaagtttgacttctctgtgaagttcaacgccttggag
ctggacgacagcgacctagcagtgttcatctctgtcatcattctcagtggagatcggcca
ggtttggtgaatgtaaagcccatcgaggacctacaggataacatgctgcaagctctggag
ctacagctcaaaatgaaccacccagactccccccagctctttgccaaactgctccagaaa
atgacagacctgcggcaggtcgtaacagaacatgtgcagctgctgcagctcctcaagaaa
acagagctggacatggacatccacccgcttctgcaggaaataatcaaggacttgtactag
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