Polyodon spathula (Mississippi paddlefish): 121298055
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Entry
121298055 CDS
T07273
Name
(RefSeq) elongation factor 1-alpha 2-like
KO
K03231
elongation factor 1-alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121298055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121298055
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121298055
03012 Translation factors [BR:
pspa03012
]
121298055
04131 Membrane trafficking [BR:
pspa04131
]
121298055
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121298055
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121298055
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121298055
Translation factors [BR:
pspa03012
]
Eukaryotic type
Elongation factors
121298055
Membrane trafficking [BR:
pspa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121298055
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121298055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
121298055
NCBI-ProteinID:
XP_041080750
LinkDB
All DBs
Position
23:24011219..24020927
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETCKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSEKRYDEIVKEVSAYIKK
IGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKLERKDHRDSGVTLLEALDTIQPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGVLRPGMVVTFAPVNITTEVKSVEMHHEALN
EAFPGDNVGFNVKNVSVKDIRRGNVCGDSKSDSPQEAAQFTAQVSTTCWTNSISAGYSPV
IDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVEMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVEKKIGGAGKVTKSAQKAQKVGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagacccacattaacatcgtggtcatcggccatgtggactccggaaag
tccaccaccactggccacctcatctacaagtgcggaggaattgacaagagagccattgag
aagtttgagaaggaggctgctgagatgggcaagggctccttcaagtatgcctgggttctg
gacaagctaaaggctgagcgtgagcgtggcatcaccatcgatatctccctctggaagttt
gagacctgcaaatactacatcactatcattgacgctccggggcaccgagacttcatcaag
aacatgatcacagggacctcacaggctgactgcgcggtgctgatcgtggctgccggagtc
ggtgagtttgaagccgggatctccaagaacggccagactcgagaacacgcgctgctggct
tacaccttgggagtcaagcagctcatcgtaggggtcaacaagatggactccaccgagccg
ccctacagtgagaaacgctacgatgaaattgtcaaggaggtcagcgcctacatcaagaag
atcggctacaacccggccactgtccccttcgtccccatctcaggctggcatggggacaac
atgctggagccctcccccaatatgccctggttcaaaggctggaagctggagaggaaagat
cacagagacagcggggtgactctcctggaggccctcgatactatccagcccccctcccgg
cccaccaacaagcccctgcgcctgccccttcaggacgtctacaagattggaggcatcggc
acagtcccagtgggcagagtggagacaggagtcttgcggccgggcatggtggtgaccttt
gcccctgttaacatcaccacggaggtgaagtcagtggagatgcaccacgaggccctgaac
gaggcgttccccggggacaacgtgggcttcaacgtgaagaacgtgtctgtcaaggatatc
cgcagaggaaacgtgtgtggagacagcaaatccgactcgccccaggaggcagcccagttt
acagcacaggtcagcaccacctgctggacaaactctatcagtgcaggctactctccggtc
atcgactgccacaccgctcacatcgcctgcaagttcgctgagctgaaggagaagattgac
cgccgctcaggaaagaagctggaggacaatcccaagttcctgaagtccggcgacgcggcc
atcgtggaaatggtgcccggcaagcccatgtgtgtggagagcttctcccagtacccaccc
ttagggcgcttcgcagtgagggacatgaggcagacagtggcggtgggggtcattaagagt
gtggagaagaagattggcggcgctggcaaggtcaccaagtccgctcagaaggcccagaaa
gtcggcaaatga
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