Polyodon spathula (Mississippi paddlefish): 121298079
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Entry
121298079 CDS
T07273
Name
(RefSeq) heat shock 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa04010
MAPK signaling pathway
pspa04141
Protein processing in endoplasmic reticulum
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121298079
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121298079
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121298079
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121298079
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121298079
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121298079
03009 Ribosome biogenesis [BR:
pspa03009
]
121298079
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121298079
04131 Membrane trafficking [BR:
pspa04131
]
121298079
03051 Proteasome [BR:
pspa03051
]
121298079
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121298079
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121298079
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
121298079
Spliceosome [BR:
pspa03041
]
Complex B
Other components
Prp19 complex
121298079
Complex C
Prp19-CDC5 complex
121298079
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121298079
Chaperones and folding catalysts [BR:
pspa03110
]
Heat shock proteins
HSP70 / DNAK
121298079
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
121298079
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
121298079
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121298079
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
121298079
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121298079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
121298079
NCBI-ProteinID:
XP_041080815
LinkDB
All DBs
Position
23:complement(19098698..19101901)
Genome browser
AA seq
645 aa
AA seq
DB search
MSAPKGVSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPSNTVFDAKRLIGRKYEDSVVQADMKHWPFMVVSEGGKPKVKVEYKGENKTFNPEE
ISSMVLIKMKEIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGSRGERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFIEEFKRKYKKDLSQNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYSSIT
RARFEEMNSDLFRGTLEPVEKALRDAKMDKSKIQDIVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILMGDTSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNT
TIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQDADKYRAQDEAQREKIAA
KNSLESYAFNMKSSVEEENMKAKISEDDKKQIIDKCNQAISWLDKNQMADKEEYEHQLKE
LEKVCNPIISKLYQGGMPGGMPGGSCGSQAQSGSASQGPTIEEVD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacccaagggagtgtctattggcattgatcttggcaccacctactcctgcgtg
ggggtgttccagcatggcaaagtggagatcatcgccaatgaccagggcaacaggaccacc
cccagctacgtggccttcacggacacagagaggctcattggagatgctgccaagaaccag
gtggccatgaaccccagcaacactgttttcgacgccaagcgactgatcggaaggaaatac
gaagactctgttgtacaggctgatatgaagcactggccgttcatggtggtgagtgaagga
gggaaacccaaggtaaaagtggaatacaaaggagagaacaagaccttcaatccagaggag
atctcctccatggtgctgatcaagatgaaagagattgccgaggcctacctgggccagaaa
gtatccaacgccgtcatcactgttcccgcttacttcaacgactcccagcgccaggctacc
aaggatgctggcgtgatcgcaggactgaacgtgctgagaattatcaatgagcccacagca
gctgccatcgcttacgggctggacaagggtagcagaggagagcgcaacgtcctgatcttt
gacctgggcggcggcacctttgacgtgtccatcctgaccatcgaggacgggatctttgag
gtgaaggccacagcaggggacacccacctgggcggggaggactttgacaaccgcatggtc
aaccacttcattgaggagttcaagaggaaatacaagaaggacctcagccagaacaagagg
gcggtcaggaggctgaggacagcgtgtgagagagccaagagaaccctgtcctccagcact
caggccagcattgagattgactctctatatgaaggcattgacttctacagctccatcacg
agggctcgctttgaggagatgaactctgaccttttcagagggacgctggagcccgtggag
aaggcactaagggatgccaagatggacaagtctaagatccaagacatagttctggtggga
ggctccactcgcatccccaagatccagaaactcctccaggacttcttcaacggcagggag
ctgaacaagagcatcaaccctgatgaagcggtggcctacggtgccgctgtgcaggcagcc
atcttgatgggcgacacttctgaaaacgtgcaggacttgttgctgctagacgtggccccg
ctgtctttgggaatcgagactgcaggaggagttatgaccgccttgatcaagcgcaacacc
accatccccaccaagcaaacccagaccttcaccacctactcggacaaccagccaggcgtt
ctcatccaggtgtatgagggagagagggccatgacgaaggacaacaaccttttgggcaag
tttgagctgtcgggcatcccccctgccccgcgaggtgtgccacagattgaggtgaccttt
gacatcgacgccaacggcatcctgaacgtgtctgcagtggacaagagcaccggcaaagag
aacaagatcaccatcaccaacgacaagggccggctgagcaaagaggagatcgagaggatg
gtgcaagacgcagacaagtacagagcccaggacgaggcccagagggagaagatagcggcc
aagaattccctggagtcctatgccttcaacatgaagagcagcgtggaggaggagaacatg
aaagccaagatcagcgaggatgacaagaagcagatcattgacaagtgcaaccaggccatc
tcctggctggacaaaaatcagatggcagacaaggaggagtatgagcaccagctgaaagag
ctagagaaagtgtgtaaccccatcatcagcaagctgtaccagggagggatgccaggaggg
atgccaggaggaagctgtgggtcccaggcacagtcaggatctgcctcccaggggcccacc
attgaagaggtggattaa
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