Polyodon spathula (Mississippi paddlefish): 121298128
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Entry
121298128 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 3-like
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121298128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121298128
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
121298128
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
IQ_SEC7_PH
RHG20_PH
DYH2-5-8_CC
Ribosomal_L32p
Motif
Other DBs
NCBI-GeneID:
121298128
NCBI-ProteinID:
XP_041080905
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Position
23:3451552..3516628
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AA seq
904 aa
AA seq
DB search
MQGVTTGCSQALLQIKCRPVVSSSPLEIRDHLPHHSSVPCLQKTGTHCVNSTAALKRPPA
QKPQVPPKPVHLQIRGLDRRSRAIPPAPSRPLPADPQPKPGKNCVSAWKEDTESPNSVCL
LIEKFESSRIPILGVYRRSQLHLSLSMDPAQEPAECSGSEPPDSSDCSTTENLALPVSEM
MSNDTELSNLSALCIDDISTCNLKTPGDCPAVNGAAGSSQLTDNQDSMLEQNGNGKVPNR
DSGIDSPSCNVEGEVFSNEEAIDEEEKEGESVAESVADTGTVNEAKESSVSSMEHKRDST
QDEEDSDMDEGSSEEHETAEVAKTEQPDTAKCTEPQKLFNIARELLQTEEAYVKRLHLLD
QVFCTKLTEAGIPQDVITGIFSNITSIDRFHEQFLLPELKTRIMEEWNTNPRIGDILQKL
APFLKMYGEYVKNFDRAMDLVNTWTQRSSQFKSVVQNIQKQEVCGNLTLQHHMLEPVQRL
PRYVLLLKDYLKKLPQDALDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGG
EEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNNMVLYCVPKLRLMGQKFSVRQKID
IAGMQVQENAKQNLTHTFAIIGKQRSLELQARXCDEKKDWIQVILATIEKHKQNSETFNK
AFNSSFSRDEDHPSDSPNVGYFSMDSLDGNTSAGGMDSCKKQPKSKREKEKQTCKGCNES
FNSITKRRHHCKACGAAICAKCSEFKPLRVCNECFDSPLALPSSPGLETTGDQKKKAAVE
KQNSLTAENSLLCSSLHFQEKGKTWHKAWVSITRNEPLVLYLLPSSQEVRLPRAILLPGY
EVSLATEKLDMKHVFKLSQSQHSILFSAEEEELQCKWIEILSKAVKGESGQEDLCSKTEA
KTNL
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggtgaccactggttgcagtcaagctttactgcaaattaaatgccgtcctgtt
gtctccagctcacccttggaaatcagagaccacctaccccaccatagctctgtaccatgc
cttcagaaaacagggacacactgtgtcaacagcactgctgcactgaagagaccacctgca
caaaaaccccaggtgccccctaagcctgttcatcttcagatccgtggtctggacagacga
tccagggcaatcccaccggcaccgtccagacctctgcctgcagacccacaacccaagcca
ggcaagaactgcgtctctgcgtggaaggaggacacagaatcgcccaacagtgtgtgcttg
ctgattgagaagttcgaaagctccagaatacccattcttggggtctataggagaagccag
cttcatctgtctcttagcatggatcctgcccaggaaccagcggagtgttcaggctctgaa
cctccggattccagtgactgctcaaccacagaaaaccttgctctccccgtctctgaaatg
atgtctaacgataccgaactctcaaacttaagtgcgctgtgtattgacgatatcagcaca
tgcaatttaaagacccctggggactgtcctgctgtgaacggggctgccgggtccagccag
ctcactgacaatcaggactccatgttggagcaaaacgggaatggcaaggtacccaacaga
gacagtgggatcgatagcccttcgtgtaacgtggagggagaggtgttttcaaacgaggag
gccatcgatgaggaggagaaggagggtgagagtgtcgctgagagcgtggcagacacaggg
acggtgaatgaagcgaaggagagttctgtttcatccatggaacacaagagagactcgaca
caagacgaggaggacagcgatatggacgagggcagcagcgaagaacacgagacagcagaa
gtggcaaaaacagaacagccagacacggccaagtgcacagagccacagaaattattcaac
attgcaagggaactcctgcagacagaggaagcttatgtgaagagacttcacctactggat
caggtattttgcactaagttaacagaggctgggattccacaagatgtgatcaccggaatc
ttctctaacatcacctctatcgatcggttccatgagcagtttctccttcctgagctcaaa
actcgaatcatggaggagtggaacacaaatcctcgaataggagacattctgcagaagctg
gcccctttcttgaagatgtatggggaatacgtgaaaaacttcgacagagccatggacctg
gtgaatacgtggacgcaaagatcatctcagttcaagagtgtggttcagaacatacagaaa
caggaagtgtgtgggaacctgaccttgcagcatcacatgctggagccggtgcagcgcctc
ccccgctacgtgctgcttctgaaggactacctgaagaaactgccccaggatgcactggac
aggaaggatgctgaaaagtcactggagctcatctcaacagcagccaaccactcaaacgca
gctattcgaaagatggagaagatgcacaaactgctggaagtgtacgaaagactggggggc
gaagaggacattgtaaatcctgccaacgaacttatcaaagagggccatatccagaaactg
tctgctaaaaacggaacagctcaagataggtatttattcctgttcaacaacatggtgctg
tactgtgtgccaaaactgcggctaatgggtcagaaattcagcgtgaggcagaagattgac
atcgcaggcatgcaggtgcaagaaaatgcgaagcaaaatttgactcacacgtttgcaata
attggaaaacaaaggtctttggaattgcaagccaggtaatgtgatgaaaagaaggattgg
attcaggttatcctggctacgattgagaagcacaaacagaacagtgagacctttaacaag
gccttcaacagctcattctcccgagacgaggatcacccctccgactcgcctaatgttggc
tacttttcaatggattcactcgatggaaacacctctgctggtgggatggattcttgcaag
aaacagcccaaatcaaagagggaaaaagagaagcaaacctgtaaaggctgcaacgaaagc
tttaattccataacaaaaagacgtcatcactgcaaagcatgtggagcggccatctgtgcg
aaatgctccgagttcaaaccgctgcgggtgtgtaacgagtgtttcgattctccactggca
ctgccttccagcccaggacttgaaaccacaggggaccagaagaaaaaagcagccgtcgag
aaacagaattcattaacagcagaaaacagcctcctgtgcagcagccttcatttccaggag
aaggggaagacctggcacaaagcttgggtctccattactagaaacgagccactggtgttg
tacctgctaccaagcagccaggaggttcgattaccacgtgccattctgctgcccggctat
gaagtcagcttggcaacagagaagcttgatatgaagcacgttttcaagctcagccaatcc
cagcacagcatattgttcagtgcagaggaggaggagctccaatgcaaatggatcgagatc
ctttctaaagcagtcaaaggggagtcggggcaggaagacctctgcagcaaaactgaagcg
aagaccaacctttaa
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