Polyodon spathula (Mississippi paddlefish): 121298183
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Entry
121298183 CDS
T07273
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121298183
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121298183
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Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
121298183
NCBI-ProteinID:
XP_041081052
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Position
23:15125061..15128818
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AA seq
418 aa
AA seq
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MQEEMERITTAQPPPSCTGKLSSLENTDLQGMDFSHMYVYKPRIGNKRGEDSKETYKLPH
RLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKTLTSLIEQQQQK
IIALQNGLHVGEQSVQSHEDSEEMFRSGFHMCAKEVLEYLSKQENSRELTPSNMMNHLHK
VASEVLQDSPSVRTEEQILKALDLKDEPSTSSQPRSFEGRGKNCVPVIQRTYTQAGGELS
GSDTDTDSGYGGEVEKNDSATNRQSYSKENELKCTMTGRVSCIKQESEDPPTKRMRTESS
EDESVSGGELMGMHSRFLGFSPHQTPMCMPFYFIPPSAATYLPMLEKCWYPASVPVLYPS
LPGSASPLTGVLNPDKHPSSLLMSPRVGSPVAAQTPMDSPALLRALKQALPLNLETKD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagaaatggaaaggattacaacagcacagccgccaccttcctgcactgggaag
ctttcgtcgctggagaacacagacttgcaaggaatggacttttctcatatgtatgtttac
aaaccaagaatagggaacaaacggggtgaagacagcaaggaaacgtacaaattgccgcac
agactaatagagaagaaaagacgcgataggattaacgagtgcattgcccaactgaaggat
ttgttgccagaacatctgaaacttacaactttgggtcatttggaaaaggcagtggttctg
gaactgactttgaaacacgtaaaaaccctaacaagtcttatcgaacaacagcagcagaaa
atcattgcgctgcagaacggcttacacgttggggagcagtcagttcaaagccatgaagac
agtgaggagatgttccgttctgggttccacatgtgtgccaaagaggtgctggagtacctg
tcaaagcaggagaacagcagggagctcaccccttcaaacatgatgaaccacctccacaag
gtggcatctgaggtcctgcaagactctcccagtgtccgaacagaagagcagatcctcaaa
gcactcgacctgaaagacgagcccagcacctcatcgcaacctcgcagcttcgaggggcgc
ggcaaaaactgtgtgccggtcattcagaggacgtacacccaggcgggtggggagctaagt
ggcagtgacacggacacagacagtgggtatggaggagaggtggagaaaaatgactctgca
accaaccggcagtcctacagcaaagaaaatgaactgaaatgcacgatgacaggcagggtg
agctgcatcaaacaggaaagtgaagatccacccacaaaaaggatgaggacagaatcgtct
gaagatgagtctgtgtcaggcggggagctgatggggatgcacagcagattcttgggtttc
tccccacaccagactcctatgtgcatgcctttttattttatcccaccatctgcggcaacc
tatttgccaatgctggagaaatgctggtaccctgcttcagtgccggttttataccccagt
cttccaggctcggcatcccctcttacaggggttctgaatcccgataagcacccatcttct
ctgctaatgtctcccagggtaggctcgcctgtagcagcccaaacccctatggactcccca
gctttgctacgagctttaaagcaagcccttcctttgaacctggaaaccaaagactga
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