Polyodon spathula (Mississippi paddlefish): 121298215
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Entry
121298215 CDS
T07273
Name
(RefSeq) iroquois-class homeodomain protein IRX-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121298215
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121298215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Myc_N
MscS_TM
Motif
Other DBs
NCBI-GeneID:
121298215
NCBI-ProteinID:
XP_041081119
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Position
23:complement(27022875..27024574)
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AA seq
369 aa
AA seq
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MKGGSSSGSVIGIWSLECSKMPASQIGFGDFFIGKNINMQHGYQTMVLGRPSGVPPVLGH
PAVAGAPRSYSGMQGYSFIPCLHLGHNMRLMSPYQLKSASPYHQALLGQGAPFYSHYRAL
AAEDRGRAGKAAARESTGALKAWLSEHLKNPYPTKGEKVMLAIVTKMSLTQVSTWFANAR
RRLKKENKVSWVCKSKTDEESESEEEEAGEKREREEEEEEEDIDLQTVDENEKEGSGSEG
SDQEPTRTPDRLSPSAPGDGLKESERDVVLGNNSESENKRVTRLGDSTKPELGAKENTAP
QKPKIWSLVETATSGTGHSAVQKRSAHHINSQDTGGLWADLTVRNGQYVPLYLPAHCSHR
HDLSCSIRK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggctccagctcaggcagcgtcattggaatttggagtctcgagtgttccaag
atgcctgcgtcacagattggatttggagatttctttattgggaaaaacatcaacatgcag
catggatatcagactatggttttggggcgcccatctggggtcccccctgttcttggtcac
cctgcagtagctggagcaccccggtcctattctgggatgcagggctatagtttcatcccc
tgtctgcatctggggcacaatatgagactaatgagtccctatcagctgaagtcagcgtct
ccctaccatcaggctctcctcggccaaggggcacccttctactcgcactaccgagccctg
gcagctgaggaccggggtagggcgggcaaagcggccgcccgagagagcaccggggcgctc
aaggcctggctcagcgagcacctgaagaacccatacccgaccaagggcgagaaggtgatg
ctggccattgtcaccaagatgagcctcacgcaggtctccacctggttcgccaacgccagg
aggcgactgaagaaggaaaacaaagtgagctgggtgtgcaagagcaaaaccgacgaggag
agtgagagcgaggaagaggaggctggagagaaaagagagcgtgaggaggaagaggaggag
gaagacattgatttacagactgtggatgagaatgagaaagaaggatctgggtctgagggt
tccgaccaggagcccaccaggactccagacaggctcagtccatcggctccaggggacggg
ctaaaggaatcagaaagagatgtagttctagggaacaacagcgagagtgaaaataagagg
gtcacacgcttgggtgattctacaaaacccgaactaggagctaaagagaatacagcgcca
cagaaacccaaaatatggtccttggtcgaaacagcaacctcgggcactgggcacagtgca
gtgcagaaaagatccgctcatcatatcaacagccaggacactggcggcttgtgggcggat
ttgactgtcaggaatggacagtatgttcctctgtatttgccagcacactgctcccataga
cacgatttgtcttgtagtatacgaaagtaa
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