KEGG   Polyodon spathula (Mississippi paddlefish): 121298226
Entry
121298226         CDS       T07273                                 
Name
(RefSeq) protein snail homolog Sna-like
  KO
K05707  snail 1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    121298226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pspa03000]
    121298226
Transcription factors [BR:pspa03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    121298226
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-C2H2_6 C2CH-3rd_BIRD-IDD zf-C2HE Zf-C2H2_ZNF451_C zf-Di19 zf-met zf-C2H2_15 Zf-C2H2_ZNF451_1st zf-C2HC_2 Zf-C2H2_ZNF451_6th zf-C2H2_11 zf-C2H2_7th_ZNF462 zf-C2H2_STOP2_C
Other DBs
NCBI-GeneID: 121298226
NCBI-ProteinID: XP_041081143
LinkDB
Position
23:23754395..23757261
AA seq 243 aa
MPRSFLVKKYFTSKKPNYSELESQTVLVSPVLTESYPGGEISAACYPSALVWDVGLLLTP
EASPLLEGPSPMDLSSLSSSEEDEGRSSEPPSPTPAEHFPCTCCSKSYSSPAGLSHHQLS
HCQGEEGVANARAFRCKHCPKEYSSLGALKMHIRSHTLPCVCTTCGKAFSRPWLLQGHIR
THTGERPFSCPHCSRAFADRSNLRAHLQTHAEVKKYQCTTCSRTFSRMSLLHKHSKAGCC
VSS
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcctcggtctttcctcgtcaagaaatactttaccagcaaaaagccgaactacagcgag
ctggaaagccaaacagtgctagtgtctccagtcctgaccgagagttacccaggaggtgaa
attagcgctgcttgctacccttcagccctggtgtgggatgtagggctcctcctcaccccc
gaggcaagccccttactggagggtcccagccccatggacctgagctctctgtccagcagc
gaggaggacgagggccgctcatcggagccccccagccccacacctgctgagcacttccca
tgcacatgctgcagtaagtcctacagcagccccgcaggactgtcccatcaccagctgtcc
cactgccagggcgaggagggggtagccaatgcccgtgctttccgctgcaagcactgcccc
aaggagtacagcagcctgggcgccctgaagatgcacatccgctcccacaccctgccctgc
gtgtgcactacctgcgggaaagctttctcccgaccctggctgctgcagggacacattcgc
acacacaccggtgagagaccgttttcctgcccgcactgcagccgtgccttcgctgatcgc
tccaacctgcgcgcccacctgcagacccatgccgaggtgaagaagtaccagtgcaccacc
tgctctcgaaccttcagccgcatgtccctcctgcacaagcacagcaaggctggctgctgt
gtgtcctcatga

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