Polyodon spathula (Mississippi paddlefish): 121298271
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Entry
121298271 CDS
T07273
Name
(RefSeq) glutamate receptor-interacting protein 2-like
KO
K20251
glutamate receptor-interacting protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121298271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121298271
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Others
Glutamate receptor-interacting proteins (GRIPs)
121298271
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121298271
NCBI-ProteinID:
XP_041081235
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All DBs
Position
23:10677709..10722699
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AA seq
1108 aa
AA seq
DB search
MLCGLRRELQSEFDDGPYSKGSKNPAGAENSLTTRRQSIPEEFRGVTIVELIKKEGSTLG
LTISGGTDKDGKPRVSNLRSGGLAARSDQLNVGDYIKSVNGINLTKLRHDEIISLLKNVG
ERVVLEVEYELPPAAPDSSSGVISKTIEICLYKEGNSFGFVLRGGAHEDWHKSRPVVVTY
VRPGGPADREGTLKASDRLLSVDGIPLHSVAHADALNTLNQCGQEALFQIEYDVSIVDSV
TNASGPLLVEIAKPPGSNLGITLTTGLHRNKQVIVIEKIKAASVVDRCGALHVGDHILSI
DGTGTEHCSVLEATQLLASTSENVKLEILSAHHSRLPLKPQETVKVQKSDHHHCWDPCVN
YCHTQHPGHCKTPTWTSSNPPTNQDYCKSLVSTNFSPGSMSTAGFFSQNSSTLPRNSQPV
SPRNTMMKRRQKKKEHKSSLSLASSSVGPGGQIIHTETGEVILRGDPLNGFGIQLQGGIF
ATETLSSPPILRFIEPDSSAERCGLLQVGDRLLSINNIPTEDGTLEEANQLLRDAALANK
VTLEVEFDVAESVVPSSGTFHVKLPKKKGVELGITISASRKPGEPLIISDIKKGSIAHRT
GTLEPGDKLLAIDNIRLENCSMEDAVQILQQCEDLVKLKIRKDEDNSDEQEMTGSIIYTV
ELKRYGGPLGITISGTEEPFDPIVISGLTKRGLAERTGAIHVGDRILAINNVSLKGKPLS
EAIHLLQMAGETVTLKIKKQVDRPNSQKKLGAMNDVSDPEDELTDSQKTCKLSEIYSTTI
PSVDSAMESWDGSGFDAGYGSQGTYIHQAAGITLHPHEWRNTKQRNSTPPANLRKNYPYT
DGGFSEDDWDKPTGYVSHHQHNPHDGLNLEHEDSFWCQALEDLETCGQSELLREIEALIM
SGSTLSLDVDGNKLHVDSVSQTGLSPRRKGAILLHADEKRKSKSSGSGAEKSWETQRIKD
EMQEIMSPTPLELHKVTVVKESDSDDFGFSVSDGFLEKGVYVNMIRPDGPANRGGLKPYD
RILQVNHVRTRDFDCCLAVPLITEAGDKLELVISRNPLALSARSQNNNREELQGKLPARA
LSAHAQTGDSEEVKLLGTRESPTSTMDL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcggattgagaagggaactgcagtcagaatttgatgatggcccatactccaag
gggagcaagaaccctgcaggggcagagaattccctcactacaagaaggcagagtatacca
gaggagtttaggggcgttacgatagtggaactaataaagaaagaaggcagtactctgggg
ttgaccatctctggaggaacagataaagacgggaaaccaagagtgtcgaacttgagatcc
gggggtctggctgcaagaagcgaccagctaaatgtgggtgactacatcaaatcggtcaat
gggataaacttgaccaagctgcgacatgatgaaatcatcagcctcttaaagaatgtgggc
gagcgtgtggtcctggaagtggagtatgagctgccccctgctgctcctgatagcagctca
ggtgttatttcgaagacaatcgagatctgtctgtataaggaaggcaacagctttggcttt
gtgttgagagggggagctcacgaagactggcacaaatcacggccagtggtggtgacctat
gtgagacctggtggcccagcagacagggaagggaccctgaaagccagtgaccgtctcctg
agtgtagatgggatacccctgcacagtgtggcacatgccgatgccctcaatacactgaac
caatgtggccaagaggccctcttccaaatcgagtatgacgtttccatcgtggattccgta
acaaacgcatcaggccctcttttggtggagattgcgaaacctccagggtcgaatctgggg
atcaccttgacaacagggttgcatcggaacaaacaagtgatagtcattgagaagatcaaa
gcagcaagcgtggtcgacagatgcggtgcgttgcacgtcggggatcacatcctgtctatc
gatggcactggtactgaacactgctcagtcctggaggccactcagctgttagccagcacc
tctgagaatgttaaactcgagatcctgtctgcacaccacagccgactgccactgaaaccc
caggaaacagtaaaagtacagaagagtgaccaccatcattgctgggacccctgtgtcaat
tattgtcatactcagcacccaggacactgcaagacccccacctggacctcctctaaccca
cccaccaaccaggactactgcaaatctctggtgtctaccaacttttctccgggctccatg
agcactgcaggattcttcagtcagaactcaagcactctgccacgcaactctcagcccgtg
agtcctcgtaacaccatgatgaagaggaggcagaagaagaaggagcacaagagctcattg
tctctggcctccagctcggtgggcccaggaggtcagatcattcacacagagactggcgag
gtgatcctgaggggggaccccctaaatggcttcggcatccagcttcaggggggaatcttt
gccacggaaaccctctcctcaccgccgatcctccgcttcattgagcctgacagctcagcc
gagaggtgtggtttactgcaggtaggagacagactactgtccatcaataacataccaaca
gaggacggaactctggaagaagctaaccagctcttaagagatgctgcgctcgccaacaaa
gtcaccttggaagtagagtttgatgttgcagaatctgttgtacccagcagcggcacattc
catgttaaactacccaagaagaaaggagtggagctgggaattacaatcagtgcaagcaga
aagccaggagagcccctgataatctcagatattaagaaaggcagcattgcacacagaact
ggcaccctggagcccggagacaagctgctggccatcgacaacatccggctggagaactgc
tccatggaggatgcagtgcagatcctgcagcagtgcgaggacctggtcaaactgaagata
cgcaaggatgaagacaactccgatgaacaggaaatgactggctctataatctacactgtg
gagctgaagaggtatggcggtccattgggaatcaccatctcgggcactgaagaacccttt
gaccccattgtcatctccggcctcaccaaaagagggctagcagagaggactggtgctatt
catgtgggggacaggatcttagccattaataacgtgagcctgaaggggaaaccactgagc
gaagccattcacctcctccagatggcaggagagactgtcaccctgaagataaagaagcaa
gtggacagaccaaattcccaaaagaaactaggagccatgaatgacgtgagcgatcccgaa
gacgagctgacagactcccagaagacgtgcaaactctcggagatctactccaccaccatt
cccagcgtagacagtgccatggagtcttgggacggctctggattcgatgcaggatacgga
agtcagggtacatacatccaccaggcagcagggatcacgctgcatccccacgaatggagg
aacaccaaacagcggaatagcacccctcccgccaacctccggaagaactacccctacact
gacgggggctttagcgaggatgactgggacaagcccacaggatatgtcagccaccaccaa
cacaacccccacgacggactaaacctggaacacgaggacagtttttggtgccaagctttg
gaagatttagaaacttgtgggcagtctgagctcctaagggagattgaggcactgataatg
agtggaagcacactcagtttggacgttgacgggaacaagttgcatgtagattctgtcagc
caaactgggttaagccctcggaggaaaggagcgatccttctccacgctgacgaaaagagg
aagagcaagagttcggggagtggggccgagaagagctgggagacgcagaggatcaaagac
gaaatgcaggagatcatgtcaccaacgccgctagaactgcataaggtcactgtcgtgaag
gagagcgatagcgatgactttggcttcagcgtctcagacgggtttctagagaagggggtt
tacgtgaacatgatccgcccagacgggccggccaaccgtgggggtctgaaaccctacgac
aggatcctgcaggtgaatcacgtacgcaccagagactttgactgttgcctggcggtgccc
ctgatcacagaggcaggagataagcttgagctggtgatcagccgcaaccccctggcactg
tctgcacgctctcagaacaacaaccgcgaggaactgcagggcaagcttccggccagggca
ctgtctgcacacgctcagaccggggacagtgaagaggtcaagcttctggggacaagggaa
agcccaacgagcacaatggatttataa
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