Polyodon spathula (Mississippi paddlefish): 121298277
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Entry
121298277 CDS
T07273
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121298277
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121298277
04261 Adrenergic signaling in cardiomyocytes
121298277
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121298277
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121298277
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA_3
VWA
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
121298277
NCBI-ProteinID:
XP_041081245
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Position
23:complement(3085338..3230440)
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AA seq
1087 aa
AA seq
DB search
MRGNLSISRVFFGFLFVIWIIFCLTLVDVSRSQQPIPLSVVKLWASAFGGEIKSISAKYS
GSQLLQKKYKEYEKSVLVEEIDGLRLVKKLAKDMEEMFHKKAEAMRRLVEAAEEAHLQHE
DDPELQYEYFNAVLINEVDQEGNSVELGQEFILQPNDHFNDLSVNISLSVVQVPTNVYNK
DSAIMNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAFDC
RNRKWYIQAATSPKDVIILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNEEL
HYVEPCLNGTLVQADRTNKDHFREHLDKLFAKGIGMLNIALTEAFTLLNDYNRTGQGSIC
SQAIMLITDGAVDTYDAVFAKYNWPDRKVRIFAYLIGRETAFADNLKWMACANKGYFTQI
STLADVQENVMEYLHVLSRPKVIDQEHDTIWTEAYIDSTLPQAQQFGNMGPVLMTTVAMP
VFSTKNETRNKGILLGVVGTDVPVQELLKTIPKYKLGIHGYAFAITNNGYILTHPDLRPL
YETGKKRRKPNYSSVDLSEVEWEDTDDFLRNAMVNRVTGTFNMEVKKTVDKGKRVLVMTN
DYYYTDIKGTPFSLGVALSRGHGQYSFRGNVTVEEGLHDLEHPDVALADEWTYCNTDLHP
EHRYLSQIEAIKLYLTGKEPLLQCDKELIQEVLFDAVVTAPLEAYWTSLALNKSENSDKG
VEIAFLGTRTGLSRINLFVVPEQLTNQDFLTAEDKEGVFNADHFPLWYKRAAEQIPGTFL
YSLPFSSGTENKSVVLASTVIQLSDDRKSPIVAAVGIQMKLDFFQRKFWTASRQCAALDG
KCPTSCDDDNISCYLIDNNGFILISEDFSQTGIFFGEVEGAVMSKLLQMGSFKRVTLYDY
QAICKIYAESSDSAHSLLDPYFAFFAAVKWILTELVIFLVEFNLYSWWYSDLTVKAQTAM
LVPCDTEYPAFVSERTIKETTGSLHCGDCTKSFVIQQIPSSNLFMVVVDQECDCTSATPI
TMEPIEIMYNESLKCERLKVQKDRRRPDSCHPFHPQENSRECGGALGLHPRLPVVLLLSL
LLTLFTR
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggaatttgagcatctcgcgtgtgttttttggtttcctctttgttatttggata
atattttgcctgacgttggtggacgtttccaggtcccagcagccgattcctctgtctgtt
gtcaagttatgggcctctgcgtttggaggagaaatcaaatcaatttcagccaaatactca
ggttcacaacttctacagaagaaatacaaagagtatgagaaatcggttctcgttgaagaa
atcgatggcctacgtctggtcaaaaagctggcgaaagatatggaagagatgttccacaag
aaagctgaagcaatgagaagacttgtagaagctgctgaagaagcccatttacagcatgag
gatgatcctgagctgcagtatgaatatttcaatgctgtgttgataaatgaagtggaccag
gaaggcaacagcgtggaacttggacaggagttcattttgcagccaaatgaccattttaac
gatttgtcagtcaacatcagcctcagcgttgttcaagtcccaaccaacgtgtacaacaaa
gattctgcaataatgaatggggtttactggtcggaagccttaaataaagtatttgttgat
aattttgaacgcgacccatctttgatatggcagtactttgggagtgcaaaaggtttcttc
agacagtatccaggtataaaatggaagccagatgaacacggagtcattgcttttgactgc
aggaacagaaaatggtacattcaggcagccacttccccaaaagatgtgatcattttggtc
gacgtcagtgggagtatgaaaggactgcgtttaacaatagctaggcagacggtttcatca
atcttggacacacttggggatgatgacttcttcaatataattgcgtacaatgaagaactt
cattacgttgagccgtgcttaaatggaacattggtacaagctgacagaaccaacaaagat
cattttagagaacatcttgacaagctttttgccaaaggaatcgggatgctcaacatcgct
ttgactgaggccttcactcttcttaacgattataatcgaactggtcaaggaagtatctgc
agccaggccatcatgctgatcacagacggagcagtggacacctacgatgcagtatttgca
aaatacaattggccagacagaaaggttcgcatatttgcctatttaattggacgtgagact
gcctttgctgataaccttaaatggatggcctgtgctaataaaggatatttcacacagatc
tccacattagcggacgtgcaagaaaatgtgatggagtacctccatgttctcagcagaccc
aaagtcatcgaccaggaacatgacactatatggacagaggcatacattgacagtacactc
cctcaggcccagcagtttggtaacatgggaccagtgctgatgactactgttgccatgcct
gtatttagcacaaaaaacgagactcgcaacaaaggtattcttctgggtgtagtggggacg
gatgttcctgttcaagaacttctgaagacgatcccaaagtacaagctaggcattcacggg
tatgcctttgcaatcacaaacaacggatatattctgactcatccagacctccgccctctg
tatgaaaccgggaaaaagaggagaaaacccaactatagcagtgttgacctctcggaagtt
gaatgggaagatacagatgactttctccgcaatgcaatggtgaacagggtaactggcacg
ttcaacatggaggttaagaagaccgtggacaaagggaaacgagtcctggtaatgaccaat
gattactactatacagatatcaagggcactccattcagtctaggagtggctttatctcgg
ggccacgggcagtactcattcagaggaaatgtcaccgtggaagaagggctgcatgacctc
gagcatccagatgtggccttggcagacgaatggacttactgcaacacagatcttcacccg
gagcatcggtacctctcccagattgaagctattaaactctacctcactgggaaagagcca
ttgttacaatgtgacaaagagttaatccaggaagtgctgtttgatgctgtggtgacagca
cctctggaagcttactggaccagccttgctttaaacaaatcggaaaattcagacaagggt
gtcgagatagcattcttaggaacgcgcactggcctctcccgaataaacctctttgtagtc
ccggagcagctcacaaaccaagacttcctgacagctgaagataaggagggtgtattcaat
gcggatcactttccactgtggtacaagagagctgcagaacagatcccaggaaccttcctc
tattccctcccattcagctcaggaactgaaaataaaagtgtggtgttagccagtactgtc
atacagctctcagatgacaggaaatctcccattgttgcagctgtaggtatccagatgaaa
ctggactttttccaaaggaagttttggaccgccagcagacagtgtgcagcacttgatgga
aagtgtcctacaagctgtgatgatgataatatcagctgttacctcatagacaacaatggg
ttcattttgatttctgaagacttctctcagactgggatattctttggtgaggtggaagga
gctgtaatgagcaaattgttacaaatgggctcctttaaacgagtaaccctttacgattac
caagccatctgtaaaatatatgctgaaagtagtgacagtgcacacagcttattggatccc
tattttgccttctttgctgcagttaagtggatattgactgagcttgtcatatttttggtg
gaattcaatctgtacagttggtggtattctgaccttacagtaaaagcacagacagccatg
cttgtgccctgcgatacagaataccctgcctttgtgtcggaacggactataaaggagacc
acagggagtttacactgcggggactgcacaaaatcatttgtgatccagcagatccccagc
agcaatctgtttatggtggtggttgatcaggagtgtgactgcacatcagccacgcccatc
acaatggaacccatagaaatcatgtataacgaatctctcaagtgtgagcgtttgaaagta
caaaaggatagaagacgcccagattcgtgtcatccatttcaccctcaggaaaactcaaga
gaatgtggaggagctctcgggcttcacccccgacttcctgttgtccttctgctgtctctg
ctcctcactctgtttacaaggtga
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