Polyodon spathula (Mississippi paddlefish): 121298288
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Entry
121298288 CDS
T07273
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121298288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121298288
03036 Chromosome and associated proteins [BR:
pspa03036
]
121298288
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121298288
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121298288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
121298288
NCBI-ProteinID:
XP_041081266
LinkDB
All DBs
Position
23:complement(24953204..24964909)
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AA seq
871 aa
AA seq
DB search
MRSDRPLPARQPRLDCATAAREDMSGKVGVEVLVMGGASPLADASAPLVANESLAPKTRP
QTTAFILPATSSPLSLAMRKGEGPRVAMETPKVGGAGEPVTSMLTPQVGGACSVVRVLEW
KEGVAVLPGSNLKFRMSDFGTLQVVSDRTVPVLEPSTEGPAGKEVETDRVPGQSSVDGIS
LSAAIPSARKTVEPTEEDSTGGNVGPCAGWSPGGEKECMDELRREPLTDKSARLDIATVA
QVSVLNPEDLKPVKKRKRKEYLSQSDEESEMESMEERVESLKVLEVNQSGCGPLGDGRQN
RTVSGEVKKEAWTWSWYLEEQKAMAAPLKLFQECQSIPQTKNSFRVGMKLEGIDPQHPSM
YFVLTVTEVCGYRMRLHFDGYSECHDFWVNSNSPDIHPAGWCEKTEHKLYTPKGQRAEGC
KEEEFSWASYLRLTKAQVAPQELFVSPGGTELPSSFQVGMKLEAVDRMNPSLICVATVTD
VVDKRFLVHFDNWDDTYDYWCDETSPYIHPVGWCQERGRPLTPPQDYPDPDNFSWEKYLK
DTGSTAVPAHCFKLRPQHGFQVNMKLEAVDKRNPSLIRVATVEDVDEYRIKIHFDGWNHM
YDYWIDSDNPDIHPAGWCERTGHPLKTPLRESNTQQPGPRDTLASGQGGCASLVCKGISH
SRAKYSFNHRKCPTPGCDGSGHVTGRFTAHHCLSGCPLAERNQGRLKTELSDTEGPGAKR
NLLVFGQRSKTSRHHGRIGRPPKYRKSQQRTYQSVSAEIIHPSFFMSALSANPDRTLSLC
WEQHCKLLPGVAGICASNVATWSVDEVSSFVENLTGCDEQARVFKDEMIDGEAFLLLTQT
DIVKIMSIKLGPALKIYNAILVFKSTDDSHK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtgataggcccctgcccgcaagacaacctcggttagactgtgcaacagcagct
cgtgaggacatgagcgggaaggttggtgtcgaggtgctggtgatgggcggagccagtccc
ctcgctgacgccagtgcgccccttgtagccaatgaaagcttggcgccgaagacacgcccc
cagaccactgcctttattctcccagccaccagctcccctctgagcctggcaatgcggaag
ggggaagggccaagagttgccatggagacgccaaaggtgggcggagctggggagccagtg
acctccatgctgacccctcaggtgggcggcgcctgcagcgtggtccgtgttttggagtgg
aaggagggcgtcgccgtgctcccaggcagcaacctaaagttccggatgagtgactttggc
actctgcaggttgtgagtgacaggacagttcctgtcctcgagccaagcacagaagggcct
gctgggaaggaggtggagacagacagagtcccaggacagagctcagtagatggtatctcc
ctcagtgctgcgattccttctgcaagaaagacggttgaacccactgaggaggactcgacg
ggagggaatgttggtccctgtgcaggctggagcccgggcggggagaaggagtgcatggat
gaactgcggagagagccactcacagacaagtcagcacgtctggacattgccacggtggcc
caggtgtcagtgttgaacccagaggatctgaagccagtgaagaagaggaagaggaaggag
tacctgagccagtcggatgaggagtcagagatggagtcgatggaggagagggtggagagt
ctgaaggtgctagaagtgaaccagtctggctgtggcccgctaggggacgggagacagaac
aggacagtctctggggaggtgaagaaggaggcgtggacgtggtcgtggtatctggaggaa
cagaaggccatggctgcccctcttaagctcttccaggagtgccagagcatcccccagaca
aagaacagcttcagagtcgggatgaagttagaggggattgatccacagcacccttccatg
tacttcgtcctcacagtgaccgaggtgtgcgggtatcgaatgaggctgcactttgacggc
tactccgagtgccatgatttctgggtaaacagcaacagtccggacatccatccagccggc
tggtgcgagaagactgagcacaaactctacactccaaaaggtcagagggcagaggggtgt
aaagaagaggagttctcctgggccagctacctgagactgaccaaggcacaggtggctcca
caggagctgtttgtcagtccaggcgggacagagctccccagcagttttcaggtggggatg
aagctggaggccgtcgaccgcatgaacccctccctcatctgtgtcgccacggtgactgat
gtggtggacaagcgcttcctggttcacttcgacaactgggatgacacttacgactactgg
tgtgatgagaccagtccatacatccaccctgttggctggtgccaggaacggggccgtccc
ctcaccccaccgcaagattacccagatcctgataacttttcctgggagaagtacctgaag
gataccggctctactgctgtcccagcacattgtttcaaactgcgccctcagcatgggttc
caggtcaacatgaagctggaggccgtggacaagcgcaacccctccctcattcgcgtggcc
acggtggaagatgttgacgagtacaggattaagatccacttcgacggctggaaccacatg
tacgattactggatcgactcggacaatcccgacatccaccctgcaggctggtgtgagaga
accgggcaccccctgaaaacgcccctccgtgagtcaaatacacagcaacccggcccccgg
gacaccttggcgtcaggacaaggtggctgcgcctctctcgtctgtaaaggaatcagccat
tcgcgagccaagtacagcttcaaccacaggaagtgccccaccccaggctgtgacggctct
ggtcatgtgaccgggcgcttcacggcacaccactgcctgtcaggctgcccgctggcggag
cggaaccagggcaggctcaaaactgagctctccgacaccgagggccctggggccaagcgc
aacctgctcgtctttggccagcgcagcaagacgtcccggcaccacggcaggataggccgt
ccgcccaagtacaggaagagccagcagagaacctatcagagtgtgtcagcggaaatcata
cacccgtccttcttcatgtcagccctgtctgccaacccggaccgcaccctatcactctgc
tgggagcagcactgcaagctgctgcccggggtggctggcatctgcgccagcaacgtggca
acctggagcgtggacgaggtttccagttttgtcgagaatctcactggttgtgacgagcaa
gcccgggttttcaaagacgagatgatcgacggcgaggcgttcctcttgctgacgcagaca
gacattgtgaagatcatgagcatcaagctgggcccggcgctcaagatctacaatgccatt
ctggtgttcaagagcaccgacgacagccataagtga
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