Polyodon spathula (Mississippi paddlefish): 121298290
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Entry
121298290 CDS
T07273
Name
(RefSeq) serine/arginine-rich splicing factor 6-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121298290
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121298290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121298290
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
SR proteins
121298290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121298290
NCBI-ProteinID:
XP_041081272
LinkDB
All DBs
Position
23:complement(24965266..24971316)
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AA seq
415 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGYGGGGGGGGGGYGGRSGGGGGSGGGYSRSRVGRDKYGPPVR
TEYRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRAMEKLD
GTDINGRKIRLVEDKPRRRRSYSGSHSRSRSRRRSRSRSRRSSRSRSNSRSRSRSRSRSK
RRSRSGRKSRSKSPARKSRSKSPARKSRSKSPARKSRSKSPARKSRSKSPARKSRSKSPA
RKSRSRSRTRKSRSRSRTRKSRSRSPSRKSRSKSVSKPKSDRDSRSPSEEKSEIKKSRSR
SCSPVENGKGDQLKSASPSTSPKPDERRSKSPPSKRSASRSPSHSKSRSRSGSRD
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgtttacattggcagattgagctatcatgtgcgggagaaggacatccaaagg
ttcttcagcggctacggcaagttgctggagatcgacctgaaaaatgggtatggttttgtc
gagtttgaagacacgcgtgatgctgacgatgccgtgtacgagctgaacggcaaggagctg
tgcggggagcgtgtgatcgttgagcatgcccgcggacctcgcagggaccgagatggatac
ggaggcgggggaggaggaggaggaggaggttacggtggacgcagtggtggtggtggtggc
agtggaggtggctatagcagaagccgtgttggcagggataagtatgggcctccagtccgc
acagaataccgtctggttgtggagaacctctccagtcgatgcagctggcaagacctcaag
gatttcatgcggcaggctggggaggttacgtatgctgacgctcacaaggagcgcaccaat
gaaggggtgattgagttccgctcccactcggacatgaagagggcaatggagaagctggac
ggcacagacataaacggtcggaagatccgcctggtggaggacaagccgcgccgccgacgc
tcctactctggaagccactccaggtcccgcagcaggcgccgttctcgtagcaggagccgc
agaagcagtcgatcccgcagcaactcaaggtcacgttcccgatcccgctcaagaagcaaa
cggcgttctaggtcaggcaggaagtcccgttctaaatcccctgccaggaagtcccgttct
aaatcccctgccaggaagtcccgttctaaatcccctgccaggaagtcccgttctaaatcc
cctgccaggaagtcccgttctaaatcccctgccaggaagtcccgttctaaatcccctgcc
aggaagtctcgttccaggtcccgcaccaggaagtctcgttccaggtcccgcaccaggaag
tcccgttcccgctctcccagcaggaagtcccgctccaagagcgtgtcaaagcccaagtca
gaccgtgactcccgcagcccctctgaagagaagtctgagattaagaagtcccgcagccga
tcctgctcacctgtggagaatgggaaaggggaccagctcaaatctgccagcccttctacc
tcccccaagccagatgagcgtcgctccaagtctcccccgtccaaacgatcagcatcccga
tccccttcacactcaaaatcccgttcccggtctggctccagagattag
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