Polyodon spathula (Mississippi paddlefish): 121298342
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Entry
121298342 CDS
T07273
Symbol
wdr6
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 6
KO
K24737
WD repeat-containing protein 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121298342 (wdr6)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121298342 (wdr6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
EIF3I
DSE1_N
Motif
Other DBs
NCBI-GeneID:
121298342
NCBI-ProteinID:
XP_041081370
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All DBs
Position
23:63114..71342
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AA seq
1240 aa
AA seq
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MLGIVVQSLRLQLSALQSFAFEKVWAVMESVLLRCPITALEFLGEDYLLSGEGPVLTVYS
LGPHRESASQSVLRNHRIHGIRPSPWRQDGGGGALLAVFGGKAVRVMELREGPSIADLSS
ISELQDWVWDVCWLQDREGSGSGVGMLAVALAHNVVVLLDPVSGRALREVRCEETCILYS
ALLVGCSWARLALISGTVFNQLVLWRPGNWGPRNEDGLARAECRVAGHQGVIFGLAYQPH
KGLLASASDDRSVRLWEVGDLSEEGGVWGSGVAGGPRCLQILYGHQARVWAVRLLSNWLL
SVGEDSACLLWGCRRGNVLRRXFKGHRGRGXRALAAIEREGGGTWVATGMADSGMGEVEI
DKGEGMVRAEGEVEIDKGEGMVRAEGEVEIDKGEGMVRAEGEVEIDKGEGMVRAEGEVEI
DKGEGMVRAEGEVEIDKGEGMVRAEGEVEIDKGEGMVRAEGEVEIDKGEGMVRAEGEVEI
DDGEETEGESSAGGRRLSQLHFSGQGTPKVIRLVGSRGQVLVMTDSGCLYCCSVGEEGVQ
GEGWQLLMEDPDFQSYSVVEVSAGSALCAVGNITGRVRVLSLSQPGGAVEVWAGRGKVHS
LCWGSREAGSELFVSGPEGRVLWWGAGQAEGAPLRVLQKGSFLLPPCRHQWLTGVAFLPG
SGDGVGLWVCGDRRGSVLLYRDREHADRQEPVSVLFGLHGRQGVTSVTVQGGLVYSTGRD
GCYRTLSVREGGPALEVLRAQRACRGMGWIERVLFQGVEGGGELVLGFHSTDLVLWDSGR
KERLLCVPCGGGHRSWSYSRDSAGFSFAFLKQGAVFLSWAPRPSSALRCSPVVRQGLHGR
EVTCLCRLGTVTTPGGAVDILVTGSEDTTLTVLAVQPSHGLITTLTTLTDHISSVRALAT
GQRGRLTHRHTDQLSTLLFSAGGRAQLQCYRLLIGWDEQQQGVSCQAIHLASHRLDEHWE
RMRNRHKTVKMDPETRYMSVAVVDARMDGGDAVFLAAACSDGAVRLFSLREGRRRLALLA
EWFHHQRCVLKVTSFTHRPGQQQGSRRVFLCSAATDGSIAFWDISDAVEGGSLEEDGGTP
QRKGLGSPCLTVWLHQCGVNSLDILETEAPGHYLLASGGDDGSLQVCRVCVDSGVAVSSV
RISARFAVSSAHAALLTGLHFLTPDLLVSASVDQRVALWRLGEAGLSWQGARFCHVADVA
GLETWQREEDQDTFLAVCGQGLQILRLGHWERLAEGAGGH
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaattgtggttcagtcactcagactacagctgtctgctcttcagagcttcgcg
tttgaaaaggtctgggcagtgatggagtctgtgttgctgcgttgtcccatcacagcgctt
gagttcctgggagaggactacttgctctcaggggagggccctgtcctcactgtgtacagc
ctgggtccccacagagagagcgcatcacagagcgtgctcagaaaccatcgtatccatggc
atccgcccatcaccgtggcgacaggatggaggtggcggggccctgctggctgtgtttgga
gggaaggcagtgcgagtgatggagctgagggaaggcccctccattgcagacctgtcctca
atctcagagctccaggactgggtctgggacgtgtgctggctgcaggacagggaagggtct
ggttctggtgttgggatgctggcagtggctctggcccacaacgtggtggttctgttggac
ccggtgtcgggccgggccctgcgggaggtgcgctgtgaggaaacgtgcatcctgtactct
gcactgctcgtgggatgcagctgggcccggctggcgctgatctctggcacagtattcaac
cagctggttctatggaggcccggaaactgggggcccagaaacgaggatggcctggccagg
gcagagtgcagagtggctgggcaccagggcgtgatctttgggctggcatatcagcctcac
aaggggctgctggcctctgcttctgatgaccgcagcgtgcgtctgtgggaagtgggggac
ctgtctgaggaggggggagtgtggggatcaggggtggctggggggccacgctgcctgcag
attctctacggtcaccaggcacgtgtctgggctgtgcgtctgctgtccaattggctactg
agtgtgggtgaggactctgcctgcctactctggggctgtcgccgtggcaacgtgctgcgc
aggtagttcaagggtcatcgggggagggggntcagggcactggcggcaattgagagggag
gggggagggacctgggtggctacagggatggccgacagcggaatgggagaggtggagatt
gacaagggagaggggatggtgagggctgaaggagaggtggagattgacaagggagagggg
atggtgagggctgaaggagaggtggagattgacaagggagaggggatggtgagggctgaa
ggagaggtggagattgacaagggagaggggatggtgagggctgaaggagaggtggagatt
gacaagggagaggggatggtgagggctgaaggagaggtggagattgacaagggagagggg
atggtgagggctgaaggagaggtggagattgacaagggagaggggatggtgagggctgaa
ggagaggtggagattgacaagggagaggggatggtgagggctgaaggagaggtggagatt
gacgatggagaggagacggagggagagagcagtgcagggggcaggcgtctctctcagctc
cacttcagtggtcagggcacccccaaagtgattcgcctggtgggctccagaggtcaggtc
ctggtgatgacagactcaggttgcctgtactgctgcagtgtgggagaggagggtgtgcag
ggggagggctggcagctgctcatggaggaccctgacttccagtcctacagcgtggtggag
gtgagtgctgggtctgcgctgtgtgctgtgggtaacatcacaggcagggtccgtgtcctc
tccctgtcccagccagggggcgctgtggaggtgtgggccggccgggggaaggtgcacagc
ctgtgctgggggtctcgggaggctggctcggagctcttcgtgtcgggccccgagggcagg
gtgctatggtggggggcggggcaggcagagggagctccgctcagggtgctgcagaaaggc
tccttcctcctgcctccctgtaggcaccagtggctcactggagtggctttcctgccaggc
agtggcgatggcgtgggcctgtgggtgtgtggggaccggcggggctctgtgctgctgtac
cgggacagagagcatgctgaccgacaggagccggtgtctgtgctgtttgggctgcatggc
aggcagggggtgacctcggtgacagtgcagggggggctggtgtacagtacggggcgggat
ggctgctaccgaaccctgagtgtgagggaggggggcccagccctggaggtcctgcgggct
caaagagcctgccgcggaatgggctggatagagagggtgctgttccagggcgttgaggga
ggcggggagctggtgctggggttccactccactgatctggtgctgtgggactcgggaagg
aaggagaggctgctgtgtgtgccgtgcggaggggggcaccggtcctggagctacagccgt
gactctgctggattcagcttcgccttcctgaagcagggggctgtcttcctgtcctgggcc
cctcgcccctcctcagctctgcgctgctccccggtggtgaggcaggggctgcacgggagg
gaggtgacctgcctgtgccgcctgggcaccgtgacaacgccgggaggagctgtggatatc
ctggtgacgggcagcgaagacaccacgctcaccgtgctggccgtccagccctcccacggc
ctgatcaccaccctgaccaccctcaccgaccacatctccagtgtgagggcactggccacg
gggcagagaggcagactgacacacagacacacagaccaactctccactctgctgttctca
gcgggagggcgggcccagctccagtgctaccggctgctgattggctgggatgagcagcag
cagggagtgtcctgccaggcaatccacctggcctctcaccgattggacgaacactgggag
cgaatgaggaaccggcacaagactgtgaagatggaccccgagaccaggtacatgtctgtg
gcagtggtggatgctcggatggatggtggagacgcagtcttcctggccgcagcctgcagt
gatggagcggtgaggttgttctctctgcgtgaggggaggcgcaggctggctctgctggcg
gagtggtttcatcaccagcgatgtgttctcaaggtgacctcgttcacacaccggccaggg
cagcagcaggggagcaggagagtgtttctgtgcagcgctgcgacggatgggagcattgca
ttctgggatatctctgatgcggtggagggggggagtctggaggaggatggtggcaccccc
cagcggaagggactgggcagcccctgtctgactgtgtggctgcaccagtgtggggtgaac
agcctggatatcctggagacggaggctccagggcactacctgctggccagtgggggtgat
gacggctcactgcaggtgtgtcgcgtgtgtgtggacagcggcgttgccgtgtcgtcggtg
cggatcagcgctcgcttcgcagtctcctctgctcacgccgcgctcctcaccggcctgcac
ttcctgacccctgacctcctggtctctgcctccgtggaccagcgtgtggctctgtggcgg
ctgggcgaggccgggctgagttggcagggagcccggttctgtcacgtggccgacgtagcg
gggctggagacgtggcagagagaggaggaccaggataccttcctggcagtgtgcgggcag
gggcttcagatactgaggctgggacactgggagagactggcagagggggctggggggcac
tga
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