Polyodon spathula (Mississippi paddlefish): 121298347
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Entry
121298347 CDS
T07273
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121298347
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u1
MAGI_u5
PDZ_2
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
121298347
NCBI-ProteinID:
XP_041081376
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All DBs
Position
23:complement(6577346..6712783)
Genome browser
AA seq
1505 aa
AA seq
DB search
MSKVMQKKNHWTAKVHDCTVCKDAEGELNVGFLGGAENGEFPYIGKVNEDNVVYKDGKLT
EGDLVLEVEGLAVSGLPLYDVLTVIKNCSGPVKLKCVKQGSRLNKDLKHYLSLRFQKSSQ
DHELQQTIRDNLYRHAVPCTTRAPRDGEVPGVDYNFLTVQEFFNFEQSGTLLEIGTYEGN
YYGTPKPPSQPLSGKVITSDALQDSQPGSQHSTPKRTKSYNDMQNAGLVHTENEDDEEVL
EMNSSFTADSSEHDEHIATQTPPREKAPLYSVNNTAVSITEHSQQPQPHLHPPEEDELGP
LPENWEMAYTENGEVYFIDHNTKTTSWIDPRCLEKQEKPLEECEDDEGVHTEELDNELEL
PAGWEKIEDPVYGVYYVDHINRKTQYENPVLEAKRKKQLEQQQPPEGERYIREWIEEHSS
AGPPLANYASNHQETYREAQAAPPPLPSQQQQPQQQPQQHAGKAFFTRNPAELKGTFIHT
KLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGYTHA
QVVKIFQSIPIGAMVDLELCRGYPLPFDPDDPNTSLVTSVAIVDKEPIIVNGQENYDSPS
SHSSQTGNMNAMKEPRPYSPSAEVTSNGSHSYPSDVVTLASSIATQPELITVHMEKGDKG
FGFTIADSLGGGGQRVKQIVDYPRCRGLKEGDIIIEVNKKNVQNLTHNQVVEMLSKCPKG
SEVTMLVQRGLVAQKKGPMPQQLERKDSQNSSQHSVSSHHSAHRDSPAHSTPVLPSYPNN
SSSNEAPASDTGDGSAQKKPDPFKIWAQSRSMYESRQPDYQEQDIFLWRKDTGFGFRILG
GNEPGEPIYIGHIVKYGASDEDGRLRSGDEVICVDGTSVVAKSHQLVVQLMQQAAKQGHV
NLTVRRKTGYAAVTKGENEVPASPASSHHSSTQAPSLTEEKRTPQGSQNSLNTVSSGSGS
TSGIGSGGGGGSAVVSTAVQPYDVEIRRGENEGFGFVIVSSVSRPEAGTTFAGNACVAMP
HKIGRIIEGSPADRCGKLKVGDRILAVNSCSITNKSHSDIVNLIKEAGNTVTLRIIPGDE
SSNASLLTNAEKIATITTTHTPQQQATPEARNNAKPKQDSQYEFKALPPTTQQPQAQDPE
FYTVDLERGNKGFGFSLRGGREYNMDLYVLRLAEDGAAVRCGKIRVGDEILEINGESTKT
MKHARAIELIKNGGRRVHMLLKRGDGSVPEYDPSNDRNTPTSGSQNLPEMRTMPSDSRLH
PLSESNYPPELHKSLQHGDKRTRESRGNREHSRLPNEHHTWNGHGNYNSLSNRRHRSPER
RRTQEPEKKVTENPVLKLGQQLLKKMDLQSSKKVDHQPRMRAENGLHHSNHRSPEKRHSG
AGNADDTWDGGQERRRARSPERRREDSSLPRRRRSLDRHEDTRRSPERKRNYSPERTRAK
STDRRRERSPERRRDRSPEKRYTDDKFWQQIKEGNTVQSSSSRGSRQPPEPKRRPYRENH
NDLSI
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgatgcaaaagaaaaaccactggacggccaaagttcacgactgtacggtt
tgcaaagacgccgaaggagagctgaatgtgggcttcctcgggggggcagagaatggagag
tttccatatattggaaaggttaacgaggataatgtggtttacaaagacgggaaattaaca
gaaggagacttggtcctggaagtggaggggcttgccgtgtccggattacccctctatgat
gtgttgacagtgatcaagaactgctcaggtcccgtcaagttgaagtgtgtcaaacaaggc
agccggctcaacaaggatctcaagcattatctaagcctgaggtttcagaagtcatcccaa
gaccacgagctgcagcaaaccatccgagataacctttatcgccacgctgtgccttgcaca
acccgcgcccctagagacggagaagtcccaggtgtagattacaacttcctcacggtgcag
gaattttttaactttgaacagagtggaactcttcttgaaattggaacatatgaaggtaac
tattatggaacacccaagcctcccagccagcccctcagtgggaaagtgattaccagtgat
gctttgcaagacagccagcctggatcacagcactcaacccccaaacgaacgaagtcttac
aatgatatgcaaaatgctggtctagtccacacagagaatgaagatgatgaagaagtcctt
gaaatgaacagcagcttcacagcagattctagtgaacacgacgagcacatcgcaacacag
acaccaccgagagagaaagcccccttgtacagcgtcaacaacaccgctgtgtcaatcacg
gaacactctcagcagccacagccacaccttcaccctcctgaagaggacgagctaggccct
ctgccagagaactgggagatggcgtacacagagaacggagaggtctactttatagaccac
aacacaaaaacaacatcctggatagacccacggtgcctggaaaagcaggagaaaccactg
gaagaatgtgaagatgacgaaggggtacacacagaggaactggacaatgaactagaatta
ccagctggatgggagaaaattgaagacccagtgtatggtgtttactatgtggatcacatc
aacagaaagacacagtatgaaaatcctgttcttgaagccaaaagaaaaaaacagctcgaa
cagcaacagccaccagaaggtgagcgatacattcgagaatggatagaggagcactcatcg
gctgggcctccccttgccaattatgcttcaaaccaccaggagacctatagagaggcccag
gcagcacccccaccactaccatcacaacaacagcagccgcaacaacaaccccaacaacat
gcaggaaaggcattcttcaccagaaaccctgccgagcttaaagggacatttatccacacg
aaactaaagaaaagcagacgagggtttggcttcactgtggttggtggggacgaacctgac
gaattccttcagattaaaagcttggttcttgatggacctgctgcacttgatggaaaaatg
gagacaggtgatgttattgtaagtgttaatgacacatgtgtactgggatatacgcacgct
caggttgtgaaaatcttccagtccattccaattggtgccatggtggaccttgaactgtgc
cggggttaccctctgccctttgaccctgatgaccccaacaccagcttggtgacctctgtg
gcgattgtggacaaggagcccatcattgtcaatggccaagaaaactatgactcgccgtct
agccatagtagccaaacaggaaacatgaacgcaatgaaggagccaaggccctatagtcct
tcagctgaggttacgtccaatggttcccatagttaccccagcgatgtggtcactttggca
tcttctattgcaacacagcctgaactcattacagttcatatggagaaaggagataaaggc
tttggttttaccatagcagacagtcttggtggtggtggccagagggtgaaacagattgtt
gattatccaaggtgccgaggcctaaaggaaggggatattataattgaagtaaacaagaag
aatgtgcagaacctgactcataatcaagttgtggaaatgctgagtaaatgccctaaagga
agcgaagtgacaatgctagttcaaagaggactggtggctcaaaagaaaggtccaatgccg
caacagcttgagagaaaagacagtcagaacagctcccagcacagcgtttccagccatcat
agtgcgcacagagactccccagctcacagcaccccagtgcttcctagctaccccaacaac
agcagcagcaacgaggcacccgcatcagacacgggggacggctctgcacagaaaaagccg
gatccctttaaaatctgggcacagtcaaggagcatgtatgaaagtaggcagcctgattat
caggagcaggacattttcctgtggagaaaagacacagggtttggatttcgaattctggga
ggcaatgaaccaggagagcctatttatattggtcatatagtgaaatacggtgcttcagat
gaggatgggcgtctccggtcaggagatgaggtgatctgtgtggatggaacctcagtcgta
gccaagtcccaccagctggtagtgcagctgatgcaacaggctgccaagcaggggcatgtg
aatcttactgtgaggcgcaaaacaggatatgcagcagtaacaaaaggtgaaaacgaggtc
ccggcctcccctgcctcctcccatcacagcagtacccaggcgccctccctgacggaagag
aagcggactccgcagggaagccagaactccctgaacactgtgagctcagggagcggcagc
acaagtggcattggcagtgggggtgggggcggcagtgctgtggtcagcaccgcggtccag
ccgtacgatgttgagatccgccgcggagagaacgaaggctttggttttgtgatagtttct
tcagtcagccgaccagaggcaggaacaacttttgcgggaaatgcatgtgtggccatgcct
cacaaaataggtcggataattgaggggagccccgctgaccgctgcggcaagctgaaagtg
ggagacagaatcctggctgtcaacagctgctccatcaccaataagtcgcactcagacatc
gtcaacttaatcaaagaagctggaaacactgtcacgctacgaatcattccaggagatgaa
tcctctaatgcgtccttattgaccaatgcagaaaagattgcaaccataacaaccacacat
acccctcagcagcaggcaacaccagaggctagaaacaatgcaaaaccaaaacaggattct
cagtatgaatttaaagccctaccaccaacaacacaacaacctcaagctcaggatccagag
ttttacactgtcgatctggaaaggggaaataaagggtttggattcagtctgcgaggaggc
cgggagtacaacatggatctctatgttcttcggttagctgaagatggcgctgctgtgcgc
tgtgggaaaattagggttggtgatgagattctggagatcaacggagaaagcacaaaaacc
atgaagcatgctcgtgcaatagaactcattaaaaatgggggccgcagagtccacatgctt
ctgaaacgtggagatggttctgtcccagaatatgaccccagcaatgacaggaacactccc
acctccggttcacaaaatcttccggaaatgagaaccatgccatcagacagtcgattacac
ccattatcggagtccaattacccaccagaacttcacaaatcattacaacatggggacaag
agaacaagagagtctagaggcaacagggagcacagcagactccctaatgagcaccacacg
tggaatgggcacggaaactacaacagcctttcaaataggagacacaggtcaccagagcgg
aggaggacacaggaaccagaaaagaaggtcacagagaacccagtcttaaagttgggacag
cagctactaaagaagatggacctgcaatcgtcaaagaaggtagaccatcaaccaagaatg
agggcggaaaatggcctgcaccacagtaaccatcgatctcccgagaagaggcatagtgga
gctgggaatgctgacgatacctgggacggcgggcaagaaaggaggagggcgaggtcccct
gagaggagacgggaggatagctctctaccccgccggaggaggtccctggacagacacgag
gatacaagaaggtcacccgaaaggaaaaggaactactctcctgaacggacaagggcaaag
tcaacagacagaagacgagagagatctccagagaggaggagagacaggtcgcctgagaaa
aggtacacagatgataagttctggcagcaaatcaaagagggaaacactgtacagtctagt
tcaagcagaggctccagacaacccccagaaccaaaacgacgaccctacagagagaaccac
aatgatctcagcatctga
DBGET
integrated database retrieval system
