Polyodon spathula (Mississippi paddlefish): 121298434
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Entry
121298434 CDS
T07273
Name
(RefSeq) sal-like protein 4
KO
K19871
sal-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121298434
03036 Chromosome and associated proteins [BR:
pspa03036
]
121298434
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121298434
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121298434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
zf-C2HC_2
Zf-C2H2_ZNF451
B129_C2H2-zf
zf-C2HE
DUF2225
Motif
Other DBs
NCBI-GeneID:
121298434
NCBI-ProteinID:
XP_041081492
LinkDB
All DBs
Position
23:complement(19762068..19773046)
Genome browser
AA seq
1090 aa
AA seq
DB search
MSRRKQAKPQQLTSDEGSLEENGVVQESRTEDDANDCKRSRMEETSVCNKCCAEFFDQSQ
FLEHKKICTKNQPVLIMKDHEGGTMPDHFSQGSPDHFLGEPAEGPSSIDARSKSSIGLVE
RMENDAEMDAEYRQKREPTAMSARPNVSYMQASKLQNTNVTLETMQSTKFAVTQHSSDNK
NSQSVGSLNAIPMILEQLVSLQQQQLQQIQLTEQIRIQVAMMAPHSLHPSIAAAADPLKA
LGAHLSQQLSAAAALIGQKTGNQSLSLENSKQGKVPHSSIAFSGGNGLLSSKSNITKVLP
NLATRLPTLLPLGSAAFQNSFSPVSAGLDPSKKGKPPNISVETKTAGAEESLFKHKCKYC
GKVFGNDSALQIHLRSHTGERPYKCNICGNRFTTKGNLKVHFQRHKEKFPHIRMNPYPVP
EHLDNIPTSSGIPYGMSMAPEESNFVDSKPASMLPTSGFPQPMLQSLAASQDSPSGNEPS
SQRPLSSGSDGASISSSMFNQDMGSDQNLESPESFASMPHLNRDELPGEQGSETAKLQRM
VESLEKKTGDPNECFICHRVLSCQSSLKMHYRTHTGERPYKCKICDRAFSTRGNLKAHYG
VHRANTPLKMQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPGSVYESSEVDSCLLD
EKSVEMNGSYNEETMEEAEMEQDSQEPASNANQLPLPSPTEGQSASPLPMLSSIAALENQ
MKNISSALNLQRQSSVRSESDCLTNDCMTNGTSSIPGDQEYQNGRSPGVSDMGSFHSSPA
NSQMGSNQSKSPETTVPEDASVAGVKLESNNGLTDSEHNGALDLTSGNFVPKAIKEEPEH
NLTNGDFSAALIPSLARFPPSLVKLEMQISSERPMGFPNQFVPPPPGMQPGMSAAPRRSA
KQHICNTCGKNFSSASALQIHERTHTGEKPFACTICGRAFTTKGNLKVHVGTHMWNSSAR
GGRRLSLDNPLAQVGGEPKMMPEVVPAPRDMVPPPINIDPAVWSQYAAVFTNGLAMKTNE
ISVIQNGGIPMPGSLAGSPPMGSNGGMMMKMDGSQSGLPGSAAEMDKPGSDGVPKHQFPH
FMEESKIAVN
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacgcaagcaagcgaagccgcagcagctcacctccgacgagggaagcttggag
gaaaacggggttgtgcaagagagcaggacagaagacgacgcgaatgactgtaagaggagc
aggatggaggagaccagtgtttgtaacaaatgttgcgcagagttctttgatcagtcacaa
ttccttgagcacaaaaaaatttgcactaaaaaccaacctgtcctgatcatgaaagatcac
gagggaggaacgatgcctgaccacttctcgcagggatctccagaccacttccttggtgaa
ccagctgaaggtccatcctccattgatgcccggtcaaaaagcagcattggtttggttgaa
aggatggaaaacgacgctgaaatggatgctgaatatcgccaaaagagagaacccactgcg
atgtcggcaagaccaaatgtaagctatatgcaagcttctaaattgcaaaacactaatgtt
acattggagactatgcagagtactaaatttgctgtaactcaacattcatctgacaacaaa
aactctcaatctgtaggcagcttaaatgctattcccatgattcttgagcagctagtaagc
ctacagcagcagcaacttcagcaaattcaactgaccgagcagattcgtatacaagtggca
atgatggctccacacagtctgcacccctctattgctgcagcagctgatccattgaaagct
ctgggggctcacttatcacagcagctttcagcggctgctgctttgatcggacaaaaaact
ggcaaccaaagcctgtctttagagaactcaaaacaaggaaaggtacctcattccagcatt
gccttttccggaggcaacggactgctgtcctccaaatcgaacattacgaaagttctccca
aacttggccactcgacttccaaccttgctacctctaggttctgccgctttccaaaactct
ttctctcctgtttcagctggtctggatccttctaagaaagggaaacctcccaacataagt
gtggaaactaaaactgctggtgctgaggagtctttgtttaaacacaagtgcaagtactgc
ggcaaagttttcggcaacgacagcgccctgcagattcaccttcgctctcacactggagag
cggccgtacaaatgcaatatttgcgggaacagattcacgaccaaaggaaacctgaaggtg
catttccagaggcacaaggagaagtttccacacattcgcatgaatccttatcctgttcct
gagcacctggacaacattcccacaagcagtggcattccttatggaatgtctatggcccca
gaggagtccaactttgtggacagtaaacctgcgtccatgctgcctacctctggctttcct
cagccgatgctgcagagcctcgccgcttctcaggattctccttcagggaatgaaccatct
tctcaaaggccgttatcgtctggaagcgacggtgcttcaatatcctccagcatgttcaac
caggacatgggttcggaccagaacttggaatccccagaaagttttgcaagcatgccccac
ctaaaccgggatgaactgcctggagagcaggggtctgagactgccaagctgcaacggatg
gttgagagcctagaaaagaagactggggatccaaacgagtgcttcatctgtcatcgtgtg
ctgagctgccagagctctctgaaaatgcattaccgtacccacacgggcgagaggccctac
aagtgtaaaatctgtgaccgggctttctctacaaggggcaacttgaaagcccattacggc
gtgcatagagccaatacccctttaaagatgcaacactcctgccccatctgccagaagaag
ttcaccaacgctgttgtattgcagcagcacattcggatgcacatgggcgggcaaatcccc
aacactcccctgcctggaagtgtgtacgagagctctgaagtggactcctgtctgctggat
gagaagagtgtagaaatgaatggcagctacaacgaggagaccatggaggaagcagagatg
gaacaggactctcaagagcctgccagcaatgcgaaccagctgcctctgccttctccgact
gaagggcagtctgcttctcccctaccaatgctatcaagcatagctgcgctggagaatcaa
atgaagaacatcagctctgctttaaacctgcaacggcagtcgagcgtaagatcagaaagt
gactgcttgaccaacgactgcatgactaatggaacgtcatctatacctggagaccaggaa
taccagaacggcaggagcccaggtgtttcagacatggggtctttccattcttctccagcc
aacagccaaatgggaagtaaccagtctaaatctccagaaactacagttcccgaagacgcc
agcgtagcaggtgtaaaattggagtctaataatgggcttactgattcggaacacaatggt
gctttagacctgacatctggcaactttgtgccaaaagcaattaaggaagaacctgaacat
aatctcacaaatggagacttcagtgctgccctcattccatcgcttgcacgatttcctcca
agtctcgttaaactggaaatgcagatctcatctgagcggccgatgggtttcccaaatcag
tttgttcctccgccacctgggatgcaacccggcatgtctgctgcaccgcgccgctctgcc
aagcagcacatctgcaatacctgcgggaagaacttctcctctgccagcgccctgcagatt
catgaacgcactcacactggtgagaagccctttgcttgtaccatctgtggaagagctttc
acaaccaaaggaaacctcaaggtgcatgttggaacgcacatgtggaacagttcggctaga
ggaggcaggagactctctcttgataacccattggcacaggtgggaggggaaccaaagatg
atgccggaggtggtgccagcacctagggatatggtgcctccacccattaacattgaccct
gcagtctggagtcagtacgctgctgtgtttaccaatggcttggcaatgaagaccaatgag
atctctgtgatccaaaacggtggcattccaatgcctggaagtcttgccggcagtccgcca
atgggttccaatgggggcatgatgatgaagatggatgggtctcagtctggcctccctgga
tcagctgctgaaatggacaagcctggaagcgacggtgtaccaaagcaccaattcccacac
ttcatggaagaaagcaaaattgcagtgaattaa
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integrated database retrieval system
