Polyodon spathula (Mississippi paddlefish): 121298436
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Entry
121298436 CDS
T07273
Name
(RefSeq) succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial-like
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00020
Citrate cycle (TCA cycle)
pspa00640
Propanoate metabolism
pspa01100
Metabolic pathways
pspa01200
Carbon metabolism
Module
pspa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pspa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
121298436
00640 Propanoate metabolism
121298436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121298436
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
121298436
6.2.1.5 succinate---CoA ligase (ADP-forming)
121298436
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121298436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Ligase_CoA_2
Peripla_BP_3
Motif
Other DBs
NCBI-GeneID:
121298436
NCBI-ProteinID:
XP_041081494
LinkDB
All DBs
Position
23:complement(6991294..7068250)
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AA seq
431 aa
AA seq
DB search
MAAPVVAQAGKSLRGTAARSVLFYKSKSVRINPQRWLNLQEYQSKELMQSSGVAVQRFFV
ADTAKNALEAAKRLKAKEIVLKAQILAGGRGKGVFTSGLKGGVHLTKDPAAVGQLAKQML
GFNLTTKQTPKEGVKVNTVMVAEALDISRETYFAILMDRACNGPVMVGSPQGGVDIEEVA
ASSPEKIFKEVIDIFQGVTDEQALCMAANLGFKGSLERQAADQIKKLYDLFLKVDATQVE
VNPLGETPEGQVVCFDAKINFDDNAEFRQKEIFAMDNTSEGDPIETEAAKYDLKYIGLDG
NIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVQESQVYQAFKLLSADPKVEAILVN
IFGGIVNCAIIANGITKACRELGLKVPLVVRLEGTNVQEAKRILNESGLPITAASDLDDA
AQKAVASLTRK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccgtggtagctcaagcagggaaaagtcttcgtggaacggcagctagatcc
gtgctcttctacaaaagcaagtctgttcgaataaacccccaaagatggctgaacttgcag
gaataccagagcaaggaactgatgcaaagcagtggggtggcggtccagaggttctttgtt
gctgatacggccaagaatgctttggaagcagctaaaagattgaaagccaaagaaattgtt
ttaaaggcacagatccttgctggtggaagagggaagggtgtcttcaccagtggactcaaa
ggaggagtacatttaactaaagaccctgctgctgttggccagctggcaaaacagatgctt
gggtttaacctcaccaccaagcagaccccgaaggaaggtgttaaagtgaacacggtgatg
gtggcagaagccttggatatttcacgggaaacatactttgccatactgatggacagagcc
tgtaatgggcctgttatggttggaagcccccaaggaggagttgacattgaagaagtggca
gcttctagcccagagaagatttttaaggaagtaatagatattttccaaggggttacagat
gagcaggcactttgcatggcagctaatctgggattcaaaggatctttagaacgacaggcg
gcggatcaaattaagaagctttatgatctgtttttgaaagttgatgcaactcaggtggaa
gtgaatccccttggagaaactcctgaaggacaagttgtgtgctttgatgcaaaaatcaac
tttgatgacaatgcagagttcagacaaaaagaaatctttgcgatggacaatacgtctgag
ggggatccaattgaaacagaagcagccaaatatgacctcaagtacattggattggatggg
aatatcgcttgctttgtaaatggggcaggactggcaatggcaacctgtgatattattgat
ctccatggtggaaagccagccaacttcctggatctgggtggaggtgtgcaagagagccag
gtctatcaggcttttaaacttctttctgctgaccccaaggttgaggcaatccttgtgaac
attttcggaggaatagtaaactgtgcgatcattgcaaatggtatcaccaaggcatgcagg
gaacttgggctgaaggtgccattagtggtcagacttgaaggaacgaacgtccaggaagcc
aagcgcattttgaatgagagtggactgccgatcactgctgctagtgacctagacgatgct
gcacagaaggcagtggccagtcttaccaggaagtag
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