Polyodon spathula (Mississippi paddlefish): 121298456
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Entry
121298456 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: pleckstrin homology domain-containing family G member 4B-like
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121298456
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
121298456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
IQ_SEC7_PH
DUF5611
Spectrin
RHG20_PH
PH_10
EFG_C
Rx_N
Motif
Other DBs
NCBI-GeneID:
121298456
NCBI-ProteinID:
XP_041081510
LinkDB
All DBs
Position
23:25229012..25248274
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AA seq
1180 aa
AA seq
DB search
MGSNTLNTRDVLQQITDLINCNDDKGVLAGSWDDYSNGVSQYQGVLPTSVKAIKEGELTL
KYDAPFVFAEVNADVVSCIQRKDGSQEKLTCTDQSAVNVSCTFAFQKLDPFFSDLREASN
LLHKAIRXFESNKHLDTVQEVQQCIQEQKTMMMSVLQDARLVGLQQEGGAMLARLKKEES
RLVYSEDYRDAMDSVTMLYNQLEERVHMLVMKSNKGLQHLDFLLKLRELEGRFKKIRELF
DAEGEKRLLEADSVEDSLERVEQTLHHFNQFLDQATEQQHKAMALVTEAEKVQRSSYPEA
EVFTVMVYTFKSQLADFLTRAEECRAQLETMVNLYRFCEKATQLVKDCRQCLEKVNPCNS
SATNLESLKTLEKYRLDFTAFSAKEFQQVKVHAYSLKGSRGTREVRQQLEERLQDIQEAQ
QPTVASPEAKRTVPAGPALLAPTTSEDPENLRPVQHQHPVKTPKSLPERRKYHHSENDYT
NVTCFKLKFKPDSKDSKGPNLKKEAAHQASSKAEEVATPKSSGEASKGLDFARVSSPTCE
WFSWQQDLGRSLSEESRTSCSLSSHSDPLASPSSRKQGQPWKKILVAAQQFQISRHGSFF
SEDSCSRPMGDCTDDLTRVSSMPAASPRIAQALGTAGDPGPREEPGKNSGNFWKLQCIME
ELLLTERDYVRSLGYIITHYFPEMERLDLPQDLRGQRGLIFGNLEKLYDFHRHFFLKELE
GSLKEPLRVGRCFLRHKESFGLYALYSKNKPQSDALLINYAHDFFKNKQLELGDKMDLSS
YLLKPVQRISKYNLLLQDMVKECGPGRGRERAELQAALEIVRFQLRHGNDLLAMDDIHDY
DVNMKEQGQLIRQDEFLVSYRKRKCFRHIFLFQDLILFSKTKKTEVGNDIYLYKQSFKTS
DIGMTHNAGDSGLCFEIWFRRRKSQDTYTFQAASAEVKDAWTKDLERILWEQALRNREIR
MQERVFMGIGSKPFIDIEHSEAAISDRAINCIPAGKECKTLPPAILPASYEHLLSQRPNS
IGSGSSVSSSGSHSSSSSGRGSLPPHGYHYSQSRQGEASRGFYRALGGLEEDELDNEAEP
LHLLLDSSESSGESISGFSSSDNSCLSVVGGEAEETSSVSSLCSKPSSLPEPQHDLIRQA
PPLYYKPRSFSATSPEAKTAAQHAGTNKPDGALSGHSTEV
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggggagtaacacattgaacacgcgcgatgttctccaacagatcactgacctgataaac
tgcaatgatgataaaggggtgctggctggtagttgggatgactactctaacggagtgagc
cagtaccagggagttttgcccacctcagtaaaagcaataaaggaaggagagctgacctta
aagtacgatgccccctttgtatttgcggaggtcaatgcagacgtggtgagctgtattcag
cgcaaagacggcagccaggagaagttgacttgcactgatcagtctgctgttaatgtatcc
tgcacgtttgcatttcagaagttggatcccttcttctcagacctacgagaggcctccaac
ttgctgcacaaagccatccganactttgagagcaacaaacaccttgacactgttcaggaa
gtccagcagtgcattcaggagcagaagaccatgatgatgtcagtcctgcaggatgcacga
ttggttggcctgcagcaggagggtggagctatgcttgccaggctgaagaaggaggagtct
cgattagtttactccgaggattaccgggatgcgatggactccgtgaccatgctatataac
cagttggaggagagggttcacatgctggtgatgaaatccaacaagggcctgcagcacctc
gactttctgctcaaactccgggagctggagggaagatttaaaaagatcagagagttgttc
gatgcggagggggagaagcggttgctggaggccgattcggtggaggattccctggagaga
gtggagcagaccctgcaccactttaaccagttcctcgaccaggccacagagcagcaacac
aaggctatggcactggtgaccgaggcagagaaagttcagcgctcttcctatcccgaggcc
gaagtcttcacggtgatggtgtacaccttcaaatcacaactggcagactttttgacgagg
gcagaggaatgccgggctcagcttgagaccatggtgaacctgtaccgcttctgtgagaag
gctacacagcttgtcaaagactgtagacagtgtctggaaaaagtcaatccatgcaacagc
tcagcaaccaacctagaaagcttaaagacccttgaaaaataccgcctggacttcactgcc
ttctcagcaaaggagttccagcaagtgaaggttcacgcttacagccttaaaggttccagg
gggacgcgggaagtcaggcagcaacttgaggaaaggctgcaggatatacaggaggcccag
cagcctacggtagcttcacccgaggctaagaggacagtgcccgcaggcccggcactatta
gcacccactaccagtgaagaccctgagaatttaagacctgtacaacaccagcacccagtc
aaaactcccaaatctctgcctgaaagaagaaaatatcatcacagtgaaaatgattacaca
aatgtaacttgcttcaagttaaaattcaagccagacagcaaagactcaaaggggcctaac
ctgaaaaaagaggctgcccaccaagcatccagcaaggccgaagaagtggcaactccaaag
agctccggggaagccagcaaaggcctggatttcgcacgtgtgtcctccccgacctgcgag
tggttttcatggcagcaggacctgggtaggtccctcagtgaggagtcccgcacgtcttgc
tccctgtcctcccattcggaccccctggcctctccttcctctcgaaaacaaggtcaaccc
tggaagaagatcctggtggctgctcagcagttccagatatctcgacacggcagcttcttc
tctgaagactcgtgttccaggcccatgggcgactgcaccgatgacctgaccagagtgtcc
tcaatgccagctgccagtcccaggattgcccaggcactgggaacagcaggggatccaggg
cccagggaagaaccagggaagaactccgggaacttttggaagctgcagtgcatcatggag
gagctgctgctgacagagagagactatgtgcgctcgctggggtacatcatcacgcactac
ttcccggagatggagcgcctggacctgccgcaggacctgcggggccagcgaggacttatc
ttcggcaacctggagaagctgtacgacttccaccggcacttcttcctcaaggagctggag
ggcagcctcaaagagcctctgcgcgtgggccgatgctttctccgacataaagaaagcttt
ggtctttatgctttgtacagcaaaaacaaaccccagtctgatgccctgctgataaactat
gctcacgacttctttaagaacaagcagctggagctgggagataagatggacctgtcatca
tacctgctgaagccagtgcagagaatcagtaaatacaacctgctgcttcaggacatggtg
aaggagtgcgggccgggacggggccgggagagagccgagctgcaggccgccctcgagatc
gtccgcttccagctgcgccatggcaacgacctgctcgccatggacgacatccacgactat
gacgtgaacatgaaggagcagggccagctcatccgacaggacgaattccttgtgtcctac
aggaagaggaagtgtttccgtcacatcttcctgttccaggatctgatcctcttcagcaaa
accaaaaagacagaagtgggaaacgacatatacctctacaaacagtccttcaagacctct
gatatcgggatgacccacaacgctggagacagtgggctgtgcttcgagatctggttcagg
cggaggaaatcccaggacacctacaccttccaggcagcctcagctgaggtgaaggacgcc
tggaccaaggatctggagaggatcctgtgggaacaagccctccgcaacagagaaatccgg
atgcaggagagggtgttcatgggaatcggcagcaaaccctttatagacatcgaacacagc
gaggcggccatcagtgacagggctatcaactgcatcccagcaggaaaagaatgtaaaaca
ctgcctcctgcaattctccccgcctcctatgaacaccttctatctcagagaccaaactca
attggctcaggaagcagcgtgtcatcttctggcagccactcctcgtcctcctcagggcgg
gggtccctccccccccacggttatcactacagccaatcccggcaaggcgaggccagccgg
ggcttctacagagcgctgggcggattggaggaggatgagctggacaatgaagctgagccc
ctccatctcctgttggacagctcagagtcctctggtgagagcatcagtggcttcagcagc
tcggataacagctgcctctctgtggttggaggagaggccgaagagacctcctccgtctcc
tccctgtgctccaaaccaagctccttgcccgagccccagcatgacttaataagacaagcc
cctcccctgtactacaaacccaggtccttctccgccacaagtccagaggcaaagacagcg
gcacagcacgctgggacgaataagcctgacggtgctctaagtggccactccacagaggtg
tga
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