Polyodon spathula (Mississippi paddlefish): 121298502
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Entry
121298502 CDS
T07273
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121298502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121298502
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121298502
GBAF(ncBAF) complex
121298502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
121298502
NCBI-ProteinID:
XP_041081580
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All DBs
Position
23:24785998..24795761
Genome browser
AA seq
403 aa
AA seq
DB search
MSVAFASARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNMGPGGISQSASNQSLHSQNNLNDSMVTGLPPTSLMQ
NQMSNGPNHVSMQQSGQTSLPTTSMSMPVSSHGSATGYSHSVASSQSMQMQSQGQSMGNY
GSRTNLNMQSNQVTMMHQQAATSHYTSAQAGSQHYQGQQPIGILGQGNQGNNMMAQRPMG
SYRPSQQGSAAQYLGQDEFYGEQYGHSQSSSEPINQQYYPDGHGEYAYQQSSYPEQSYER
TFEESSQHYYEGGNSQYSQQQASYQQGSTQQQPFTQQQYPSQQSYAGQQQGYGPAQGASS
QYSGYQQGQGQQYSSYRASQTAPSAQQQRPYAYEQGQYGNYQQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgcatttgcttcagctcgaccgaggagcaaaggggaggtgacccagcagacg
atacaaaagatgctggatgaaaaccaccatctgatacagtgcattatggattaccagagc
aagggtaaaacagcagaatgcactcaatatcaacaaatactgcacagaaacctggtttac
cttgctacaatagcagactccaatcagaacatgcagtctctgttacctgcacctcccacc
cagaatatgaacatgggccctggaggcatcagtcagagtgcatcgaaccagtctctccat
tctcagaacaacctgaatgacagcatggtgactggcctccctcccacctctctcatgcaa
aaccagatgagcaacggtcctaatcatgtgtccatgcagcagtctggacagacgtccctc
cccaccacttccatgagcatgccagtcagcagccacggctcggccacgggctacagccac
tcagtggcctcgtcacagagcatgcagatgcagagtcagggccagtccatgggaaactat
ggctcccggacaaacctcaacatgcagtccaatcaagtcacaatgatgcaccaacaagcc
gcaacatcccattacacttcagcacaagccggaagccaacactaccaggggcagcagccc
atcggaatactgggacagggtaaccaaggcaacaacatgatggcccagaggcccatggga
tcctaccggccctcacagcaaggatctgctgcgcagtacttagggcaggacgagttctac
ggagagcagtatggacacagtcagagctccagcgagcctattaaccagcaatattacccc
gatggccatggagaatatgcctatcagcagtcttcataccctgagcagagctatgagcgg
accttcgaggagtcgtcccagcactattacgaaggaggaaactctcaatacagccaacag
caggcctcttaccagcagggctccacccagcagcagccattcacacagcagcagtacccc
agccagcagagctacgctggacagcagcagggctacggcccagctcaaggagcgtcttca
cagtactcgggctaccagcagggacagggccagcagtacagctcctaccgggcttcccaa
actgcaccctccgcacagcaacagagaccttacgcatacgagcagggccagtatgggaac
taccagcagtag
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integrated database retrieval system
