Polyodon spathula (Mississippi paddlefish): 121298556
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Entry
121298556 CDS
T07273
Name
(RefSeq) heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa04010
MAPK signaling pathway
pspa04141
Protein processing in endoplasmic reticulum
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121298556
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121298556
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121298556
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121298556
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121298556
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121298556
03009 Ribosome biogenesis [BR:
pspa03009
]
121298556
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121298556
04131 Membrane trafficking [BR:
pspa04131
]
121298556
03051 Proteasome [BR:
pspa03051
]
121298556
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121298556
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121298556
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
121298556
Spliceosome [BR:
pspa03041
]
Complex B
Other components
Prp19 complex
121298556
Complex C
Prp19-CDC5 complex
121298556
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121298556
Chaperones and folding catalysts [BR:
pspa03110
]
Heat shock proteins
HSP70 / DNAK
121298556
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
121298556
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
121298556
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121298556
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
121298556
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121298556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
DUF1464
Hydantoinase_A
ParM_N
Motif
Other DBs
NCBI-GeneID:
121298556
NCBI-ProteinID:
XP_041081616
LinkDB
All DBs
Position
24:complement(18055268..18060889)
Genome browser
AA seq
437 aa
AA seq
DB search
MSKGPAVGIDLGTTYSCVGIFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPTNTVFDAKRLIGRRFDDPVVQSDMKHWPFKVINDAGRPKMEVEYKGEVKTFYPEEVS
SMVLTKMKEISEAYLGKSVSNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA
IAYGLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSH
FIAEFKRKHQKDIAGNKRAVRRLRTACERAKRTLSSSTQASLEIDSLYEGADFYTSITRA
RFEELNADLFRGTLEPVEKSLRDAKMDKAQIHEIVLVGGSTRIPKIQKLLQDFFNGRELN
KSINPDEAVAYGAAVQAAILAGDKSDNVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTI
PTKQTQTFTTYSDNQPG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggggccggccgttggcatcgacctgggcaccacctattcctgtgtggggatc
ttccagcatggcaaagtggagatcatcgccaacgaccagggcaaccggaccacacccagc
tacgtggcattcaccgacaccgagcgcctgatcggagatgcagccaagaaccaggtggcg
atgaacccgaccaacaccgtcttcgatgcgaagcgactgattggccggcgcttcgatgac
ccggtggtccaatccgatatgaagcactggcccttcaaggtgatcaacgacgctggccgg
cccaagatggaggtggagtacaagggggaggtgaagaccttctacccggaggaggtgtcc
tccatggtgctcaccaagatgaaggagatctccgaggcatacctggggaagtccgtgtcg
aacgctgtcatcactgtgcccgcctacttcaacgactcccagaggcaggccaccaaagac
gcggggaccatctccgggctcaacgtgctgcgcatcatcaatgagccgacagccgctgcc
atcgcgtacgggctcgacaagaaggtgggcagcgagcggaacgtgctgatcttcgacctg
ggcggtggcaccttcgacgtgtccatcctgaccatcgaggatgggatctttgaggtgaag
tccacggccggcgacacacacctgggcggggaggacttcgacaaccgcatggtcagccac
ttcattgcggagttcaagaggaagcaccagaaggacatcgcgggcaacaagcgggccgtg
cgacgcttgaggacggcttgcgagagggccaagcgcaccctgtcctccagcacgcaggcc
agccttgagatcgactcgctctacgagggggccgacttctacacctccatcacgcgggca
cgcttcgaggagctcaatgccgacctcttcaggggcaccctggagcctgtggagaagtcg
ctccgggacgccaagatggacaaggctcagatccacgagattgtgctggtcgggggctcc
acccgcatccccaagatccagaaactcctgcaagatttctttaatggccgggagctgaac
aagagcatcaacccggacgaggctgtggcgtatggggcggccgtgcaggctgcgatcctg
gcgggtgacaagtctgacaacgtgcaggacctgctgctgctggacgtcacgccgctgtcc
ctgggcatcgagacggccggaggagtgatgaccgtcctgatcaagcgcaacaccaccatc
cccaccaagcagacccagaccttcaccacctactcagacaaccagcccggg
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