Polyodon spathula (Mississippi paddlefish): 121298630
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Entry
121298630 CDS
T07273
Name
(RefSeq) rho GTPase-activating protein 33-like isoform X1
KO
K20647
Rho GTPase-activating protein 32
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121298630
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121298630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
SH3_9
SH3_1
SH3_2
PX
RPEL
Motif
Other DBs
NCBI-GeneID:
121298630
NCBI-ProteinID:
XP_041081694
LinkDB
All DBs
Position
24:20383391..20421784
Genome browser
AA seq
1674 aa
AA seq
DB search
MQRRGSVSMPQWVQQCTKLMRAMSLSEMGGHLPYSVKRKLWARSTDNLDSTGDPLSHSVG
TVATIKGKMSKRLSIVKGHFPKLIDCAHFHYENVDFGPIQLQFANDPSNDSWTLSPAKDA
VFLVQVSCQGKTWLVRRTYEEFRTLDSHLHMCIYDRRYSQLEQLPPIEDIDERVDVPRLS
EYLGRLSMIVDNKLNCGPVLSWMEIDNRGNHFLLKEEASLNVPAIGAAHVTKRYTAQASD
EISIEVGDILSVIDMPPKEETSWWRGKHGFQVGFFPSECVELINERLSQSVSAPVPKQDS
DNCGSKAGIVSVPGPNSPSSVSKKHGKLLGFLRTFMKSRPSKQKLKQRGILKERVFGCDL
GEHLLNSGYEVPQVLSCCSEFIEKHGVVDGIYRHSGVSSNIQKLRHEFDSEIIPDLTGEL
YMQDIHCVGSLCKLYFRELPNPLLTYQLYDKFADCMTVMSEEERLVKVHDVIQQLPPPHY
RTLEFLMRHLSQLATRSKETNMHIKNLAIVWAPNLLRCKEIECVGLSGTDAFKEVRIQSV
VVEFLLNHVDILFSDSFTSVGKSCAGLCSLTRPKSFVVSSLSTRLLSLEEAQARTQAHLL
CSAQAGLLALQADPMTFQGKYHSVIDIPAERRKSGMKVRKSAGGSWRAFFAIGKPPGSQR
RKSARVGSLFQASQAERGTRIETVTLRSAKSEESLCSQHSGAGLSKHQRLRRPRSSSDAL
SVTMETELLSTLKHCRSYDSVQAEDPEGVYMLPDFSHEASLWLAEDEMDFSPTYLEEAGL
ELEPLTFRCGPQRLVTEDPDSLMNQSEVAVKKSFVNQPPRRVQSCCQQLKTSAVTNPLTQ
TSEISSPAPEKLSKSTSFTRKMVHALSPKGNKSPPMDISEPISITVPAKVLEMIGGRAGE
FQRASGAQNLATAADQPPQMISMLLRSCDIQLTENCQQEIRSKLSFTESKVKGHSVPSFQ
LSEHSSVMDHSQLQAGFLMAAAPLSSQVPPPPPPKNPARLMALALAESANKALKQSQREP
RPQGGDGGGASVEARFMRSPSVDSNECLSSGANPLYSTVRSLSVWKPERGPQLQSEKGDS
DGQNHIRSQLQESGTFSSQTSLSESGASTHSSSAETDSPYKPPQPKLHSVTACQPQDNPP
SLSNQAAAASSVPELNAENQLPGKKAPAYSRQFSAPHLQHKHPAPPAKHTNHHHHPQFHH
SKCKSSPIIHSSSHPRAFQPARPKVPPKPPELNAGVPLHRNESYSRRSQDQARPRMLLAS
QSTPPFSRNDSEGVSYMDPKTRCHLDQSRGFATSSVQVYHNRSSSNPQIFTGRSEDQVKH
ENFYYEIAPEPSFVQIPQYNYQNVGNQVQFEGVPYRLPRPGFEHAFADRHLRSHDISVRP
HLWTGISQNMNLTVERSLAVQGNAAGYTQVAGIPYSAVPQESPAHQPSAPFRMVPVSRTE
VAPNQGTSTHHRNVYRAQRSPSADLSASQLHPYFENGKVCYRYLEEGAAHEGETRVVQDH
RPQASVSAPKSPKPQEQPEPIYVNFPFNPGKAWTSTNLDGDQHSEPPPTGSSSDKSGTEP
PSVFEENVSSQESSSDPWQRAGSSVASQYDNFPPSLEEKPRGSEAVHFRSKSDPGNASIE
GPGELQNLGPEEKDHVNHSTEPPAAESGNDGASRCLATLCEMPSLPQQQQQQQQ
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaagaggctcagtctcaatgccccaatgggttcagcagtgcaccaagcttatg
cgtgcaatgagtctgtccgaaatgggaggtcatttgccgtattcagtaaaacggaagtta
tgggcaaggagtacagataatcttgacagcacgggggaccccctgtctcactccgtgggg
acagtcgccaccattaaagggaaaatgagcaaaagactgtccattgtgaagggacacttc
cccaaactgatagactgtgctcacttccactatgagaatgtggatttcgggcctatccag
ttgcagtttgcgaacgatccaagcaacgatagttggacgttgtctcctgccaaggacgct
gtctttctggtgcaggtctcctgccagggaaagacctggctggtcaggagaacctacgag
gagttcagaacattggacagccacctccacatgtgtatctacgatcgcagatactcccag
cttgagcaactgcctcccattgaagacattgacgaaagagtggatgttccccggctctct
gagtatcttggacgtctctccatgattgtggacaataaactaaattgtggacccgtgctt
tcatggatggagattgacaacagagggaaccacttcctgctgaaagaagaggcttccctc
aacgtccctgctattggcgctgcgcacgtcaccaagagatacacagctcaagcgagcgat
gagatctccattgaggttggagatatcttatctgtgattgacatgccaccgaaggaggaa
accagctggtggcgagggaaacatggcttccaggttgggttctttccaagtgagtgtgtg
gagctgatcaatgagagactgtcccaatctgtctctgctccagtccctaaacaagattct
gacaactgcggctcaaaggcaggaattgttagtgtccctggaccgaactccccttcttca
gtttctaagaagcatgggaagctgttggggttccttagaacattcatgaagtcacggcct
agtaaacaaaagctgaagcagagagggattctgaaggagagggtgtttggctgtgacctg
ggagagcacttgttaaactctggctacgaagtcccacaggttctgagttgctgttcagag
tttattgagaaacacggggtcgtggacgggatttatagacactctggagtctcctcaaat
attcagaagttacgccacgagtttgacagtgaaatcatccctgatctgactggtgaactc
tacatgcaggatatccactgtgtgggatccctgtgcaagctctacttccgggagctccct
aaccccttgctcacctaccagctgtacgacaaattcgcagactgcatgactgttatgagt
gaagaggagagattggttaaagtccatgatgttattcagcagctaccaccaccacactat
cggactcttgagttcctgatgaggcacttgtcccaactggcaacacgtagcaaagaaacc
aacatgcacattaagaaccttgccatcgtctgggcaccgaacctgctgcgttgcaaggag
attgagtgcgtggggctgagtgggacagatgcattcaaagaggtgcgcattcagtctgtg
gtggttgagtttcttctgaatcacgtggatattctcttcagcgattcctttacatcggtg
ggaaaatcctgtgcaggactgtgttcgttgactaggcccaaatcctttgtggtctcctct
ctgtccactcgactgctgtctctggaagaggctcaagccaggacccaggcccacctgctc
tgctctgcacaggccggccttctcgcgctgcaggcagatcccatgactttccaagggaaa
taccacagcgttattgacatacctgcagaaaggaggaagagtggtatgaaggtgagaaaa
tcggcaggcgggagctggagagccttctttgccatcggtaaaccgccaggatcccagcgg
aggaagtctgcgcgagttggatcactgttccaggcttcacaggctgaaaggggaacgcgg
atagaaaccgtgacactccggtctgcaaagagtgaagagtctctttgttctcaacacagt
ggggctggcctctccaagcatcagcgtctacgtcgacctcggtccagcagtgatgccctc
tccgttactatggaaacagaacttctgtccaccctgaagcactgccgctcctacgacagt
gttcaggccgaggaccccgagggcgtttacatgctgcctgacttttcccacgaggcctcg
ctgtggctagcagaggacgagatggacttcagccctacttatttagaggaggctggcctg
gaattggaacccctgaccttccgttgcggcccacagcgtcttgtcactgaagaccctgac
tccttgatgaaccagtcagaagttgctgtgaagaaaagctttgttaatcagcctcctcgg
cgagttcagtcctgctgccagcagctcaagacttcagccgtaacgaaccccttgacccag
acttcagagatctccagccctgctcctgagaagctaagcaaatcaacctcttttaccaga
aagatggttcacgccctttcccctaaaggcaacaagtccccaccgatggatatctccgag
ccaatctccatcacagtgcctgctaaagtcctagagatgattggtggaagggctggagag
ttccaaagggcaagtggagctcagaacttggctacagctgctgaccaaccccctcagatg
atctctatgctgttgaggtcatgtgatattcagctcaccgagaactgccaacaggaaatc
aggagtaagctgtccttcacagagtcaaaggtcaagggccactcggtccccagtttccag
ttatcggaacactctagtgtgatggaccattcacagcttcaagcaggctttttgatggca
gccgccccactgtcttcccaggtgcctccgccacctcctccaaaaaaccctgcccggctg
atggccctggccctggcagagagcgccaacaaggctctgaagcagagccagcgagagccc
cgcccacaaggaggagatgggggaggggcttccgtagaggcgcgattcatgaggtctccg
tcggtggactccaacgaatgcctgtcttcgggggccaaccctttgtactccaccgtgcgg
tctttgtctgtgtggaagcctgagcgagggccccagctacagagtgagaaaggagactcc
gacggacagaatcatatcaggagccagctgcaggaatctggtaccttttcatcccagacc
tctctttccgagtctggagcatccacacatagttcctcagccgaaactgattcaccctac
aaacctcctcagcccaagctccattcagttacggcttgccagccacaagacaaccccccg
agcctttctaatcaagctgctgctgcttcttctgtaccagagttgaacgctgaaaatcag
cttcccggcaagaaggcaccagcctattctagacagttttctgccccccatcttcaacat
aagcaccctgcccctcccgccaagcacacgaaccaccaccaccacccacaattccatcac
tcgaaatgcaagagctctcctatcattcacagctcctctcatccaagagccttccagcca
gccaggccaaaagtgcccccgaagcctccagaactgaacgctggggtgccgctgcatcgt
aatgagagctattccaggcgatctcaagaccaggcaaggcccagaatgcttcttgcgtct
cagtccacgcctccgttttccaggaatgattcggaaggagtttcctacatggatccgaaa
acccggtgtcatttggatcaatccaggggatttgctacttcctctgttcaggtctaccac
aacagatctagcagtaaccctcagatattcactgggagatcagaggaccaagtcaagcac
gaaaacttttactatgagattgcgccagagccctcctttgtacagatccctcaatacaat
tatcagaatgttggaaaccaggtgcagtttgaaggagttccttaccgccttcccaggcct
gggtttgaacatgcctttgcggacaggcatttaaggagccatgacatttcagttagacct
catctttggactggaatctcacagaacatgaaccttactgtggagcgatccttagcagtg
cagggcaatgctgctggttatacacaagtagcaggtattccctattccgcagtgccccag
gaaagccctgcacaccagccctctgcaccctttagaatggttcctgtctctcggactgag
gtggctcctaatcaggggacctctacccaccatagaaacgtctacagggcccagcggtcc
ccttctgcagatctctcagcctcacagctacacccctactttgaaaatgggaaagtctgt
tacaggtaccttgaagaaggggctgcccatgaaggtgagaccagggtcgttcaggaccac
cgacctcaggcttctgtgtctgccccaaagtctcccaaacctcaagagcaaccagagcca
atatatgtcaattttcctttcaacccaggcaaagcctggacatcaaccaacttagatgga
gaccaacattcagagccacccccaactgggagctccagtgataaatctggtacagagcct
ccttcagtcttcgaagagaatgtctcaagtcaggaatcttcatctgacccctggcagagg
gctggcagttcagtggcgtctcagtacgataacttccctccatctctggaggagaaacca
cgaggttcagaagcagtccacttcaggagcaagtctgatcctggaaacgccagcattgaa
ggtcctggagagttgcaaaatctaggtccagaggaaaaagatcacgtgaaccactcgact
gaaccacctgcggctgaatctggaaacgatggagcttcaaggtgtcttgcgacgctgtgc
gagatgccttctcttccccaacaacagcagcagcagcagcagtag
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integrated database retrieval system
