Polyodon spathula (Mississippi paddlefish): 121298808
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Entry
121298808 CDS
T07273
Name
(RefSeq) zinc finger and BTB domain-containing protein 9-like
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121298808
04121 Ubiquitin system [BR:
pspa04121
]
121298808
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121298808
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121298808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2
zf-C2H2_4
DUF5810
C2CH-4th_BIRD-IDD
zf-Di19
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121298808
NCBI-ProteinID:
XP_041081971
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Position
24:24578509..24586890
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AA seq
711 aa
AA seq
DB search
MMMDQSSSSCSSTSHCLPRLPSKTSMSSRLVHVDFPEVPVSLLESLNQQRLEGQLCDLSI
QVQGQEFRAHRCVLAASSPYFHDQVLLKNVSSVVLPSVMDPLAFESVLGSAYTGRLSMVR
DELINYVTVGSFLQMWHVVDKCTELLREGRGLLQSSQPPSNEQQSPSSTNYCSPPEGAGE
AANQQQQGHLYSSSSTGHPSKYCRGDAREAGHSPPQDSDEHVGSPPSSDQQRWLVGRLSS
SIRSLALPLQRSQYPQPSGFDSASYADELSLTSSSGSNPRSRPRLDPNVGFTNLRATGLA
AGLGGKRSRSKSARTRYRCPEPLPSLSARLGGRGRGRRGKAPSSQEGSELLLTCEEDGGG
MERHRGEEDGGGMLHRDKGRGDDGVEVGQSRSDLLGEMMLREAEEMMARHGHQTRGWSET
QTQQMGAGAGVHAGLEQPSSFAREEPEESELDESQSFPYQSQYQRSRIRHSENPLGLHVS
PYEPGLHPSSSSTPPHPSSPSPGPADQVPFCESSQDFVSTYDEIEEGTGQVSQRPLLAPP
PSSGEQQQQEGGGFPGMAGTPPLAGAPYTGKVHMCHCGKAYTLKSMRDRHVKMQHLNLRP
FACPVCAKTFKMKHHLTKHLKTHAGLQPFECQLCGKKLMWRDSFLRHRSHCERLAAEEIA
ASTAGVKEEEEEEEEGDQGGLGYLLKEKEKEEDEKEEGSGGGSFRQRDSFA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggatcagtcttcgtccagctgcagcagcaccagtcactgcctccccaggctg
cccagtaagaccagtatgagtagcaggctggtgcatgtggatttccctgaggtgccggtg
tcattgctcgagagtctaaaccagcagaggctggaggggcagctgtgtgatctgagcatc
caagtgcagggccaggagttcagggctcaccgctgtgtgctggcagcctcctcgccgtac
ttccacgaccaggtcctcttgaagaacgtctcgtcggtggtcctcccctctgtcatggac
cccttggcctttgagagtgtgctgggctccgcctacacgggcagactgagtatggtcagg
gacgagctcatcaactatgtgacggtgggcagcttcctgcagatgtggcacgtggtggac
aagtgtacggagctgctgagggagggcaggggactcctgcagagcagccagccccccagc
aacgagcagcagtcccccagcagcaccaactactgcagcccaccagagggcgctggcgaa
gcagccaaccaacagcaacagggccacctctacagcagcagcagcaccggtcaccccagt
aagtactgccggggtgacgcgagggaggctggccattcgcccccccaggacagtgatgaa
cacgtaggttcccccccgtcctccgatcagcagaggtggctggtgggaaggctgagcagt
agtattcgcagccttgccctcccacttcagcgctcccagtatccccagccatctggtttt
gactccgccagctacgcggacgagctgtccctgaccagcagcagtggcagtaacccccga
tccaggccacgcctcgacccgaacgtgggcttcactaacctgcgtgccaccggcctggct
gcaggactcgggggtaagcgcagccgcagcaagagtgcgaggaccaggtaccgctgccca
gagcccctcccctcgctgtctgccaggctgggaggcagaggcagggggaggagaggcaag
gcccccagctcacaggaggggagcgagctgctgctgacctgtgaggaggacggaggcggg
atggagagacacaggggggaagaggacgggggtgggatgctccaccgtgataaggggagg
ggtgatgatggtgttgaagttggtcagagtcgcagtgacttgctgggagagatgatgctg
agagaggccgaggagatgatggcccgccatggacaccagaccagggggtggagtgagacg
cagacccagcagatgggagccggagccggggtgcatgcaggtctcgagcagccatccagt
tttgctagggaagagccagaggaatctgaactggatgaaagtcaatccttcccttaccag
agccaataccagcgtagcaggatccgacactcggagaaccccctgggtctccatgtaagt
ccctatgagcctggcctgcaccccagcagcagcagcacccctccccatccctcctccccc
agccccggccctgctgaccaggtgcctttctgcgagtcctcccaggactttgtctccacg
tacgatgaaatcgaggaggggacagggcaggtgtcccagcgcccgctccttgcccctccc
ccctcctcgggggagcagcagcagcaggaggggggcgggttccctggcatggccggcacc
ccaccgctcgctggtgccccctacaccggcaaggtgcacatgtgccactgcggcaaggcc
tacaccctaaagagcatgcgggaccggcacgtgaagatgcagcacctgaacctgcggccc
tttgcctgtcccgtctgcgccaaaaccttcaagatgaagcatcacctcaccaagcacctg
aagacccacgctggcctgcaacccttcgagtgccagctctgcggcaagaagcttatgtgg
agggacagcttcctgcggcaccgcagccactgcgagaggctggctgcggaggagattgca
gccagcacagccggagtgaaggaggaggaggaggaggaggaggagggtgaccagggggga
ctgggatacctgttgaaggagaaggagaaggaggaggatgagaaggaggaggggagtgga
ggggggagcttcagacagcgagactcttttgcttga
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