Polyodon spathula (Mississippi paddlefish): 121298834
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Entry
121298834 CDS
T07273
Name
(RefSeq) vesicle-trafficking protein SEC22b-like isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121298834
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121298834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121298834
Membrane trafficking [BR:
pspa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
121298834
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
DUF932
CC_CDK5RAP2
DUF5617
Imm70
Motif
Other DBs
NCBI-GeneID:
121298834
NCBI-ProteinID:
XP_041082016
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Position
24:23880500..23886797
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AA seq
216 aa
AA seq
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MTTLTMIARIQDGLLLAASMQESEQSGRNLQEYQNQAKQLFRKLNENSPHRCSLETGPMV
FHLLLAQGVCYLVLCEGSYSKRLAFSYLEELQAEFSELYGKRLASVSRPYAFIEFDTFIQ
KLKKNYQDSWSRRHLSSVNTELQDVQRIMVTNIEEVLQRGEALSALDSKASNLSALSKKY
RQDAKYLNTRSLYAKIGAASAVCIILFLYARFWWLV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgactactctcactatgatagcacgaatccaggacggactgctgctggccgcatccatg
caggagagcgaacagtcgggtcggaacctgcaggagtatcagaaccaggccaagcagctc
ttcaggaagctgaacgagaactctccccaccgctgctcgctggagaccgggccaatggtg
ttccacctcctccttgctcagggggtgtgttacctggtgctgtgtgagggctcctactcc
aagaggctggcgttctcctacctggaggagctgcaggctgagttcagcgagctgtacggc
aagaggctggcatccgtgtcgaggccgtacgcgtttatagagtttgacacattcattcaa
aagctgaagaagaactaccaggactcctggtctcgccggcacctgagctcggtcaacaca
gagctgcaagacgtgcagaggatcatggtgaccaacatcgaggaagtgctgcagagagga
gaggcgctgtcagcgctggactcaaaagccagtaacctgtctgccctgtcgaagaagtac
aggcaggatgccaaatacctgaacactcgttctctgtacgccaagataggagcggcaagc
gcggtgtgcataatcttattcctctacgcacgcttctggtggctggtttga
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