Polyodon spathula (Mississippi paddlefish): 121298859
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Entry
121298859 CDS
T07273
Name
(RefSeq) ETS domain-containing transcription factor ERF-like isoform X1
KO
K09434
ETS domain-containing transcription factor ERF
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121298859
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
121298859
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Gene cluster
GFIT
Motif
Pfam:
Ets
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
121298859
NCBI-ProteinID:
XP_041082049
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Position
24:19460548..19486418
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AA seq
779 aa
AA seq
DB search
MKTPGETAGLAFPDWAYKPESSPGSRQIQLWHFILELLRKEECHDIIAWQGDYGEFVIKD
PDEVARLWGARKCKPQMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVLVNYPFI
DMGPGGGVPQSAPPVPTGGPHFRFPSTPSDVLSPNEDLRSPNVFSAVARRMARGSVSDCS
DGTSVNSEIEEGIGGGGGGGGGGEERGGVPRELPVPGGFRGLPPSLHPRLSHDSLFRVYP
HGRPHRVDPLSPFPVSPLPGPGGSMMGPQLSPALPMTPGHLNYTPSPTLSPMYSSHFSFN
SEDMKRYLQAHTQSVYNYHLSPRAFMHYPNIIVPQPQRLDKGHPLHANLHSNHSSSSSSS
SSQHPLPPPPSAHHLQHHPAPPQQQQPSGEDHLSSFKFKLQPPPLGKKHRERALNGAGAA
PGGVPSSSFGSSASGTLTSSFAGSNAAASSSSSSSTSTASNCHSSAGPGVPQIKVEPISE
SESEEVEVEGISEDESFSREGEEEDFGDEEDYLDEDVFKTPAAPSPHTPSGGGLLDGYQF
TAHHSPHQHYHQTHSRHLQQYQQQAGASSRRGAASALASPSASSRTGSHAPSSALAGPAA
FPVSPKPEPLDLESQPGFGNGAAGGVSGSERSGSVPSSPGIGVGTGGGGVVGGSSSSSSS
KCIPLKLRFKRRWSEDQRMEASSEESDDKKVRGEEQKQESPLGEGERGSSSSSSAGKVMP
LPAMMDHEEEGSRSREDKGKIEIHNSSSPDPPENSVATRRVSTELHRATAQLSLENKEC
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccccggcgaaacagctgggcttgccttcccagactgggcgtacaagccggag
tcgagcccgggctcgcggcagatccagctgtggcacttcatcctggagctgctgcgcaag
gaggagtgccacgacatcatcgcgtggcagggggactacggggagttcgtcatcaaggac
ccggacgaggtggcgcggctctggggcgccaggaagtgcaaaccccagatgaactacgac
aagctcagccgggcgctcaggtattactacaacaagcgtattcttcacaagaccaaaggc
aagcgattcacttacaagttcaacttcaacaagctggttctggtcaactaccccttcatt
gacatgggacctggaggcggggtccctcaaagcgcccctccagttcccacagggggtccc
cacttccggttcccgtccaccccctcggacgtgctctccccgaacgaggacctgcgcagc
cccaacgtgttctccgccgtggcgcggcgcatggctcgaggatcggtgagcgactgcagc
gatggcacctccgtcaactcggagatcgaggagggaatcggagggggagggggaggggga
gggggaggggaagagagggggggggtccccagagaactgccggtgcctggcggcttccgc
gggctccccccttccctccacccgcgcctgtcccacgactccctcttcagggtctaccca
cacggccggccgcacagggtggaccccctcagccccttccccgtgtcccccctcccgggc
cccggagggtccatgatgggtccccagctgtccccggccctgcccatgactcccggccac
ctgaactacacaccttcccccacgctcagccccatgtacagcagccacttctccttcaac
agcgaggacatgaagcgctacctgcaggctcacactcagagcgtctacaactaccatctc
tcccccagggccttcatgcactaccccaacatcatagtgccccagccgcagaggctggac
aaggggcatccgctgcacgcaaacctgcatagcaaccactcctcctcctcctcctcctcc
tcctcccagcaccctctaccacccccgccttccgctcaccacctgcagcaccacccagcc
cccccgcagcagcagcagccctcgggagaggatcacttgtcctccttcaagttcaagctc
cagcctccgccgctgggtaagaagcacagagagcgggctttgaacggtgccggcgccgct
cccggtggggttccctcatcctctttcggctcctcggcttccggtaccctgacttcatcc
tttgcagggagtaacgccgccgcctcctcctcctcctcctcctccacctccactgcatct
aattgtcattcttcagccggtccgggggttccccagatcaaagtggagcccatctccgag
tccgagtcggaggaggtggaggtggagggtatcagcgaggacgagagcttctccagagag
ggggaggaagaggatttcggggatgaagaggactatctggacgaggatgtcttcaagacc
cccgcggccccctctcctcacacccccagcgggggcggcttgctggatggctaccagttc
actgcccatcacagcccccaccaacactaccatcaaactcacagccgacacctgcagcag
taccagcagcaagcaggagccagcagccggagaggggctgcctctgccctggcatccccc
tcggcttcatcgcggaccgggagccacgctccctcctctgccctcgctggccccgctgct
ttcccagtctcccccaaaccagagcccctggatttggaatcgcagcctggatttggtaac
ggggccgcgggaggggtttcgggatcggagaggagcggcagtgttccttccagcccggga
attggagtgggaacgggcggaggaggagtcgtcgggggcagcagcagcagcagcagcagc
aagtgcatccctctcaaactgcgcttcaagagacgctggagcgaggaccagaggatggaa
gcgagctccgaggagtccgacgacaaaaaagtgaggggtgaggagcagaagcaggagtcg
cctctgggagagggggagcgagggagcagcagcagcagcagcgctgggaaagtgatgcca
ctgccagcgatgatggatcacgaggaggaaggcagcaggagcagagaggacaaggggaag
attgagatccacaatagcagcagccctgacccaccggagaacagtgtcgccacacgcaga
gtgagtaccgagctgcacagagccacagcccagctctctctggagaacaaggagtgctga
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