Polyodon spathula (Mississippi paddlefish): 121298955
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Entry
121298955 CDS
T07273
Name
(RefSeq) S phase cyclin A-associated protein in the endoplasmic reticulum-like isoform X1
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121298955
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121298955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
zf-met
Motif
Other DBs
NCBI-GeneID:
121298955
NCBI-ProteinID:
XP_041082266
LinkDB
All DBs
Position
24:11713526..11806879
Genome browser
AA seq
1474 aa
AA seq
DB search
MSNDCRSEGRRRGAGQHRLGSGLDGKERAGKRVGPGGGDGRERSVSNSSGSSHGGGKERN
ISLKASFQRSNSHDKVRKIVAEEGRSARNLIAWSVPLGSREDGGKAKPQVPSSQRSQRIT
AGLHRNKKQNASLDSKTAAVVLEKNAEKSPSKARQPRKVDLRARYWAFLFDNLRRAVDEI
YVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDALNRPTSLAWEVRKMS
PGRHVISSPSTDRINPTPSARRTLNFGGPPATLSSSRLTPTGSSWADKVKSAHTATAANR
TGSGLCQPTSQNTLWKPAEKHGQKGKKDAEGWETVQRGRPARPRSAVMIAKMTAAPAPQS
PKDDSNKENTQHGPAEVYPDREQLDLEKLRNAELTEEKADSQTEDAVQLTADSPEDSEKS
GSLPLQEISREPWAETPEVHTDAVCPSEGLRVEVAPAASGTDQTPIETVKLESELDPTEL
SDHCQHFQTQSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIQAEENNDYNLEA
DSEGDFSTSIGSGIMSYCGLSMDWNEVLADYEAREPWRQSTSWGDIVEEEPARPPGHGIH
MHEKLSSPSRKRTIAESKRKHEEKQLKAQQLRKKLREEQTHKLQKLLEREKEVRKWKEEL
LDQRRKMMDEKLLHAEFKRELQLQAIVKKAQEEDAKVNEIAFINTLEAQNKRHDVLAKLK
EYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLIRRKGQEARIELQR
QERERAREDAARERARDREERLAALSAAQQEAMEELQKKIQQKHDESSRRHMEQIEQRKE
KAAELSSGRHANTDYAPKLTPYERKKQCSLCNVTITSEVYLFSHIKGKGHQQAVRDSSSI
QGRELSDEEVEHLSLKKYIVDIVTDSSVPVETVKDGEEKQKARKKAKKLRARMNSRGKEY
ETSLEAKIQVPDSPYKAKLQRLVKDLVKQLPGQDSGHWTNNKVSGLDRTLGEISRILEKQ
NNADQVAFQVGGGLSALEQILQVVTAASCPNAVPRIPLKSLCSAVNTYYLACSSCQNNCS
YVLFGNKITFLVDMLIHQLTLHVPDEDKTIFGRSVSKQVFEGLTTGLLKTTASVLGFLLS
NLPEGNSQPGTPRISTQETKNKSSPNEALNCRVQDLISYLVYMGLIDKLYGCFLSIQGPV
DENPKMATFLQHATELLDGMCKLCFAVTGRSPSIFDNKRQDPTGLTALLQSTDLVGVLHM
LYCILLHGSTPDPNTASSVEGYPESVIQVAIHSIRFMNSFALLDLSAFQSVLGAEGLSLA
FRHIISSLLWYCSHHTCEHLLHEVIICIGYFTVNHQDNQVIVQSGRQPSVLQKLCQLPFQ
YFSDPRLIKVLFPTLISACYNNSQNKVILEQEMSCILLATFIQDFAPSSSKPENGTSQQA
EKVSQSLDYLELSNRFPREQWDAALQFFLEKQDN
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgattgccgcagcgaaggcaggcggcgaggagctggtcagcaccgccttggg
tcgggacttgatggcaaagagagagcggggaagagagtgggccccggtggcggggatggc
agggagagatccgtcagcaacagctcgggatcgtcgcatggtggagggaaggagaggaac
attagcctcaaggcttcctttcagcgctcaaacagccatgacaaggtgaggaagatcgtg
gcagaggaaggccgcagtgcacggaatctgattgcctggagtgtgcccttgggaagcaga
gaagacgggggaaaggccaagccccaagttccaagcagtcaaagatcacaacgcatcact
gcaggtctacatagaaacaaaaaacagaatgcctccttggatagcaagacagcagctgtt
gttctggagaagaacgcagagaagagcccaagcaaggccaggcagccgagaaaggtggac
ctgagagctcgctactgggcttttctctttgacaacctgagaagggctgtggatgaaatt
tacgtcacctgcgaatccgaccagagcgtagtggaatgcaaggaggtgcttatgatgtta
gacaactatgtacgagatttcaaagctttaatcgactggatacagctgcaggaaaagctg
gagaaaacagatgccctgaacagacccacatccctggcatgggaggtgaggaaaatgtct
ccagggcgtcatgtgatatccagtccatcaacagacaggattaatcccacaccgagcgcc
cgcaggactctgaacttcgggggacctcctgccacactgtcatcctcacgcctcaccccc
acagggtccagctgggcagataaggtcaagtctgctcatacagccacagcagccaatcgg
actggatccgggctttgtcagccaacctctcagaacacactgtggaaaccagctgagaaa
cacggtcagaaaggtaaaaaagatgcagaaggctgggaaaccgtgcagcgtggaagacca
gctcggcccagatctgctgttatgatagctaagatgactgcagccccagctccccagagc
ccaaaggatgacagcaataaggaaaatacacaacatggtcctgcagaagtgtacccagac
agagaacagctggatctggaaaaactgagaaacgcagaacttacagaagagaaagcagac
tcccagacagaggacgcagttcagttgacagcagacagtcccgaggattcagagaagtct
ggcagcttgcccttgcaggagatttccagggagccctgggcagaaactccagaggttcac
acagacgctgtctgtccttcagagggactgagggtcgaagtggctcctgcagcatctggt
acagaccagactccaattgaaacagtgaaactggagagtgaactggaccccacagagctt
tcagatcattgccaacactttcagacccaatccatggcagaagttttagcaaagaaggaa
gagctggcagaccgcttggagaaggcaaacgaggaagccatcgccagcgctattgctgaa
gaggagcagctgacgagggagatccaggctgaggagaacaatgactacaacctggaggca
gacagtgagggcgacttctctactagcataggcagtggaattatgtcctactgtggcttg
tccatggattggaatgaagtcttagctgattatgaagccagagagccatggcggcagagc
acttcctggggggatatagtggaggaagaaccagcccgccctcctggccatgggattcac
atgcatgagaagctctcctccccttcacggaaaaggacaatagcagaatctaaaaggaaa
catgaagagaagcagctaaaggcgcagcagctccgaaaaaaactaagagaagaacaaact
cacaaactgcagaagttgttagaaagagagaaggaggtcaggaagtggaaggaggagctc
ttggatcagagaaggaagatgatggatgagaaattgctccatgcagagtttaaacgagag
ctgcagttacaggccatcgttaaaaaggcacaagaggaagacgctaaggtgaatgagatt
gcttttataaacactcttgaagcacagaacaaaaggcatgatgtcctggccaagctgaaa
gagtatgaacagaggctgaatgagctgcaggaggaacgccagcggagacaggaggagaag
caggcgcgcgatgaggctgtgcaggagcgcaaacgagcccttgaagcagaacggcaggcc
cgggtggaagagttattgataaggaggaaaggacaagaagctcgaattgaactgcagaga
caggagagagagcgggcgcgggaggatgcggcacgggaaagagccagagatcgagaggag
cgacttgctgccctgagtgcagctcaacaggaagccatggaggaactgcagaaaaagata
cagcaaaagcatgacgaaagcagccgcagacacatggaacagattgaacagaggaaagaa
aaggctgcagagctcagcagtggaagacacgccaatactgactacgcacccaaactcaca
ccttatgaacgcaaaaaacagtgttcgctctgtaatgtgacgatcacctctgaggtgtac
ctgttcagccacatcaaagggaaggggcaccaacaggcagtgagagacagcagcagcatc
cagggcagggagctctccgacgaggaagtggaacacctttccttaaagaagtacattgtg
gacattgtgactgatagctctgtgccggtggagacggtgaaagacggagaggagaaacag
aaagcgaggaaaaaagcgaagaagcttcgagctcggatgaactccaggggaaaagagtat
gaaacctctctagaagcaaagattcaggttcctgactcgccatataaagccaagttacag
aggctggtaaaggacctggtgaagcagctcccggggcaagatagtggtcactggacaaac
aacaaggtgtctggcctagacagaacacttggggagatctcaaggatcttagagaaacag
aacaatgcagatcaagtagcatttcaggtcggaggggggctctcagccctggaacagatt
ctccaggtagtcactgcagcctcctgtcctaatgcagtcccacgcattccattaaagtcc
ttgtgcagtgctgtaaatacatactacttggcttgcagtagctgccagaacaactgctct
tacgttctatttgggaacaagatcactttcctagtggacatgcttattcatcagttaacg
ttgcatgttcctgatgaagataagactatttttggaaggagtgtaagcaaacaggtattt
gaagggctgacaacaggactccttaagaccactgcatcagttctgggattcctcctctcc
aatctccctgaggggaacagtcagcccggcacacccagaatatcaacacaggaaacaaaa
aacaagtcttccccaaacgaggccttaaattgcagggtgcaagacctcatcagttactta
gtgtatatgggcttgattgacaagttgtatggctgcttcctctctatacaaggccctgtt
gatgagaatccaaagatggcaacattcctgcaacacgctacagagctcttagacggcatg
tgcaagttatgctttgctgtgactggcaggtctcctagcatttttgacaataaacgtcag
gatcccacagggctaactgccctgcttcagtccactgatctggtgggagtgctccacatg
ctctattgcatcctccttcacgggtcaaccccagatcccaacacagccagttctgtcgag
ggctacccagaaagcgtcatccaagttgccatccacagcattcgcttcatgaatagtttt
gcacttttggacctgtcggcattccagtctgtgttaggcgctgagggcctctctctggct
ttccgacacattatcagctccctgctgtggtattgctcccatcacacctgcgagcacctg
cttcatgaggtcatcatttgtattggatacttcacagtcaaccaccaagacaaccaggta
atcgtgcagtctggccgccagcccagtgtgctgcagaaactgtgtcagctgcctttccaa
tatttcagcgacccgcggctgatcaaagtgctcttcccgacgctcatctcagcttgctac
aacaacagccagaacaaggtcatcctggagcaagaaatgagctgtatattactggctact
ttcatacaggactttgcaccgagttcaagcaagcctgaaaacggaacgtctcagcaagca
gaaaaggtctcccagtctctggactacctcgagctgtcaaatcgtttccccagagaacaa
tgggatgcagccctgcagttttttctagaaaagcaagacaattga
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