Polyodon spathula (Mississippi paddlefish): 121299012
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Entry
121299012 CDS
T07273
Name
(RefSeq) transducin-like enhancer protein 4 isoform X1
KO
K04497
groucho
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121299012
04330 Notch signaling pathway
121299012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121299012
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
121299012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_IP5PC_F
HALZ
Motif
Other DBs
NCBI-GeneID:
121299012
NCBI-ProteinID:
XP_041082378
LinkDB
All DBs
Position
2:62670537..62770027
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AA seq
774 aa
AA seq
DB search
MIRDLSKMYPQARHPAPHQPAQPFKFTISESCDRIKEEFQFLQAQYHSLKLECEKLASEK
TEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVIPFLSQEHQQQVVQAVERAKQV
TMAELNAIIGQQQLQAQHLSHGHGLPVPLTPHPSGLQPPAIPPMGSSAGLLALSSVLSGH
PQLPIKDEKKHHENDHQRDRDSVKSLSVSPSASFRAAEKHRNSTDYSLDSKKQKTDDKDL
ATRYDSDGEKSDDNLVVDVSNEDPVSPRGSPAHSPRENGLDKPRLIKKDAPISPASLASS
SSTPSSKSKELNLNEKSTTPVSKSSTPTPRSDAPTPGSNSTPGLRAVPGKLPGADPLAPG
LRTPMAVPCPYPAPFGIVPHAGMNGDLTSPGTAYAGLHSISPQMSAAAAAAAAAAAYSRS
QVVSFDPHHHMRVPGIPPNLSGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHAR
QINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSC
RLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG
NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF
TSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFAHCGKWFVST
GKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgattcgagacctgagcaagatgtacccccaggctaggcacccagctccacatcaacca
gcccagccctttaaattcaccatatcggagtcctgcgataggattaaagaagagtttcag
tttttacaggctcagtaccacagtttgaagctggaatgtgaaaaattggccagtgagaag
actgaaatgcagcgacattacgtgatgtattacgagatgtcgtatggactgaacatagag
atgcacaaacaggcagagattgtcaagaggctgaatgctatttgtgcccaagttattccc
ttcttatcccaggagcaccagcagcaagtggttcaagcagtggaaagagccaaacaagtt
accatggcagagctaaacgccatcattgggcagcagcagctccaggctcagcatctctca
catggacatgggcttccagtgcccctcacgccccacccctcgggtctgcagcctccggcc
atccctcccatgggtagcagtgcaggtctcctggccctgtccagtgtgcttagtggacat
cctcaactaccaatcaaagatgagaaaaagcaccacgagaatgatcaccaaagagacagg
gactccgtaaagagcttgtctgtgtcaccatcggctagtttcagagcagcagagaaacac
aggaactctacagattactccttggacagcaagaaacagaagactgatgacaaagatttg
gcaacccgctatgatagtgatggagagaagagtgatgataacttggtggttgatgtttct
aatgaggacccagtttctcctcgaggaagcccagcacattccccaagagagaatggcctg
gataagccacgcttgatcaagaaggatgctccaatcagcccagcctctctcgcttcctcc
agcagcaccccatcgtcaaagtcaaaagagcttaaccttaatgagaaatctactactcca
gtgtcaaaatccagcaccccaactccacgctcagatgctccaactccgggcagcaactcc
actccaggactgcgggctgtacctggcaagctaccaggagctgacccattagctcctggt
ttgcggaccccaatggcagtgccatgcccttacccggctccttttggcattgttcctcat
gctggcatgaatggcgacctgaccagcccagggacagcctatgcaggcctgcacagcatt
tctccacaaatgagtgctgccgctgcggccgctgctgcagctgctgcctacagtcgatca
caggtggttagctttgatccacaccaccacatgagagttcctgggatccctccgaacctg
tctggcattcctggaggaaaaccagcctattcgtttcatgtgagtgctgacggccagatg
cagcctgtgcccttccctcctgatgctctgattggtccagggatcccacggcatgcccgt
cagatcaacactttgaatcacggagaggtggtgtgcgcagttaccatcagcaatcccact
agacacgtgtatactggtggcaagggctgtgtgaaggtctgggacatcagccaccctggc
aacaagagcccagtttctcagctggactgtctgaacagagataactacatccgttcctgc
agattgctccctgacgggcgcaccttgattgtcggcggggaggccagcacgttatccatc
tgggacctggcggctcccaccccacgcattaaggcagagttgacatcgtcggctcctgcc
tgctatgctctggccatcagtcctgattccaaggtctgcttctcctgctgcagtgacggc
aacatcgcagtctgggatctgcacaaccagacactagtcaggcaattccagggccacacg
gatggagctagctgtattgatatttccaatgatggcaccaagctgtggacaggaggcttg
gacaacacagtcaggtcctgggacctccgagaagggaggcagctacagcaacatgacttc
acttcccagatattttctttgggatactgccctacaggagaatggctggctgtggggatg
gagaacagtaatgtagaggtgttgcacgtcacaaaaccggacaaataccagttacatctc
cacgagagctgtgtgctgtcactcaaatttgcccattgtggtaaatggtttgtgagcact
gggaaagataacttgctgaatgcttggaggacaccatatggagccagcatattccagtca
aaggaatcgtcctccgtgcttagctgcgatatctctgtggatgataaatacattgtcaca
ggctctggggacaagaaggccaccgtctatgaagttatttattag
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integrated database retrieval system
