Polyodon spathula (Mississippi paddlefish): 121299021
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Entry
121299021 CDS
T07273
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121299021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121299021
04131 Membrane trafficking [BR:
pspa04131
]
121299021
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121299021
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121299021
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121299021
mRNA cycle factors
P-body specific factors
121299021
Membrane trafficking [BR:
pspa04131
]
Others
Actin-binding proteins
Myosins
121299021
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121299021
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121299021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
HTH_17
nSTAND3
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121299021
NCBI-ProteinID:
XP_041082395
LinkDB
All DBs
Position
24:complement(9966855..10027980)
Genome browser
AA seq
1897 aa
AA seq
DB search
MAASELYTKHARVWVPDAEEVWKSAELLKDYKQGDALLQLRLDDGTDVEHKLDPKTKNLP
HLRNPDILVGENDLTALSYLHEPAILHNLKVRFMDSKLIYTYCGIVLVAINPYETLPIYG
ADIINAYSGQNMGDMDPHIFAVAEESYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASETNVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFNKKYQIIGANMR
TYLLEKSRVVFQADDERNYHIFYQLCASAQLPELKVLKLGQATNFHYTKQGRSPVIDGVD
DAKEMVNTRHACTLLGISEPYQMGIFRILAAILHLGNVEIKARDSDSSIVPPNNAHLTVF
CDLMGVTYQDMSQWLCHKKLKTAAETYIKPIPKLQAVNARDALAKHIYAKLFDWIVDHVN
KALRSTVNQNSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECRMPKGSDDTWAQKLYNTHLNKCALFHK
PRLSNKAFIIQHFADKVEYQCDGFLEKNKDTVNEEQITVLKTSKKFELLVELFQDEEKAT
SPTGPPPGGRTRLSVKQTKTRPGQTSRDHKKTVGLQFRNSLQLLMDTLNATTPHYVRCIK
PNDNKHPFTFDPSRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD
RRLTCRNVLEKLIKDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRVACIRIQKTIRSWLL
RKKYLRMRSAAITIQRYVRGYQARCLAKFLRRTQAAVTIQKFQRMYRERKRYRRMQAASL
VVQCMLRAYMARQKYQAMLQEHKTIIIQKRVRGWLARLHYKRSLEAVVYLQCCIRRMRAR
RELKKLKIEARSVEHFKKLNIGMENKIMQLQRKVDEQHKDKKAMTERLNSLANSYAVESE
KLRNEVERLRLTEEEARNNSNRITTLLEELARLKKELCDTQRDKRTIEEWADKYKLETEQ
LVAELKEQNLLLKTEKDDLNRLIQEQNQEMTEKMEKALAEETKQLECELNEERSRYQNLL
TEHRRLEDRHDDLKEEMTLMVNIPKPGHRRTDSTHSSNESEYTYNSEFAESEESARGAED
VTKAPLDMSLFLKLQKRVTELEQEKQSLQNELDKKEEQAYRARAREEDEQNRARGAELEY
ESLKRQELDSENKKLKNDLNELRKALSEKSPPGVTAPGSPAYKVVMEQLNSSNEELEVRK
EEVLILRSQLVSQKEAIHQKENKQTMTEAMPCMEDVHKMRDAGEITQAYLALKESNRSPK
FTSKPVAVSDLMSRIRSPPQDYHALNEDGELWLVYEGLKETNRLLESQLQTLRKSHENET
EVLREELQSVKEDNNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPT
KYQFYRISLYKRIIDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVSGQMENVSPGQIID
EPTHPVNIPRKEKDFQGMLEYKKEDESKLVKNLILELKPRGVAVNLIPGLPAYILFMCLR
HADYVNDDQKVRTLLTSTINGIKKILKKRGDDYETVSFWLSNTCRFLHCLKQYSGEESFM
KHNTPRQNEHCLSNFDLAEYRQVLSDLAIQIYQQLVKVMENILQPMIVSGMLEHETIQGV
SGVKPTGLRKRTSSIADEGTYTLDSILRQLNSFHSTMCQHGTDPELIKQVIKQMFYIIGA
VTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMTSGAKETLEPLIQAAQLLQVKK
KTDEDAEAICSMCNALSTAQIVKVLNLYTPVNEFEERVSVSFIRTIQIRLRDRKESPQLL
MDTKNIYPVTFPFNPSSLALETIQIPSSLNLLFLTRV
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatctgagctctatacaaagcatgcccgggtatgggtccctgatgcagaagaa
gtctggaagtcggctgaacttctcaaagactacaagcaaggagatgcattgcttcagctc
agactggatgatggcacggacgtggaacacaaattggaccccaaaaccaaaaacttgccc
catctacgtaacccagacatccttgttggtgaaaatgacctcactgccctcagctacctc
catgagcctgcgatcctgcataacctcaaagtgcgcttcatggattcaaagcttatctac
acctactgtggtatcgtcttggtggccatcaatccctatgagacgcttcccatctatgga
gcggacatcatcaatgcatacagtggacagaatatgggggatatggatccgcatatattt
gcagtggccgaggagtcatataaacaaatggccagggatgagaggaaccagtctatcatt
gtgagtggagaatccggtgcagggaagacagtgtccgccaagtacgccatgagatacttt
gctacagtcagtggttcagccagcgagaccaatgtggaggagaaagtgctggcatccaac
cccatcatggagtctataggaaatgccaaaacgaccagaaatgacaatagcagtcgtttt
ggtaagtatattgagattggattcaacaagaagtatcaaatcattggagccaacatgaga
acctacctgctggagaaatcaagagtggtgtttcaggcagatgatgaaaggaattaccat
attttctaccagctttgtgcctctgcacaattgccggagcttaaagtccttaaactcggc
caggcaaccaacttccactacacaaaacaagggaggagccctgtgattgatggggttgat
gatgcaaaggagatggtcaacactagacacgcctgcactttactaggtatcagtgaaccc
taccagatgggaattttccggattcttgctgctatcctgcaccttggaaatgtggagatt
aaagcccgggattctgacagcagcatagtccctcctaacaatgcccacctcactgtcttc
tgtgacttgatgggagtgacatatcaggacatgtcccagtggctgtgccacaagaagctc
aagacagcagcagagacctacatcaaacccatccccaaactgcaggccgtcaacgccagg
gacgcccttgccaagcatatctatgccaagctctttgactggatagtggaccacgtcaac
aaagccctgcgctccactgtcaaccagaactctttcattggagtgcttgatatttatgga
tttgagacgtttgagatcaacagcttcgaacagttctgtataaattatgcaaacgagaaa
ctgcagcaacagtttaacatgcatgtgttcaaactggaacaagaggagtacatgaaggaa
cagatcccgtggacattgatagacttctatgacaatcagccttgtatcaatctgatagag
gccaaaatgggaattctagatttgctggatgaggagtgcaggatgccaaaaggatctgat
gatacatgggcccagaagttatataacactcacttgaacaaatgtgctctgttccataaa
cctcgcctctcaaataaggcttttattatccagcactttgccgacaaggttgaataccaa
tgtgatgggtttttagagaagaataaagacacggtcaatgaagagcagattactgtgctg
aaaacaagcaagaagtttgagttactagtggagctgtttcaggatgaggagaaggcgacc
tccccaacagggcccccgcctggcggtcgcactcgactcagcgtcaaacaaaccaaaaca
cgccccggacaaaccagccgggaccacaagaaaactgtggggcttcagtttcgtaactct
cttcagctgctaatggatacgctgaatgctaccaccccccactatgtgcgctgcatcaaa
ccgaatgataacaaacaccccttcacgtttgatcccagtagagctgtgcagcagctcaga
gcttgtggtgtcctggaaacaatccgtatctctgcagcaggcttcccatcaaggtggacg
tatcaggagttttttagccgctaccgtgttctcatgaaacaaaaggatgtgttgagcgac
aggaggctaacgtgtaggaatgtcttggagaagctgatcaaggatcaagacaagtatcag
tttggtaaaacaaagattttcttccgggccgggcaagtggcctacctggagaaactacga
gccgacaaactgcgcgtcgcctgcatccgcatccagaagaccattcgcagctggctgctg
cgcaaaaagtacctgcgcatgcggagcgcagccatcaccatccagagatatgtccgcggc
taccaggcacgatgccttgccaagttcctgcgccggacccaggctgccgtcaccatccag
aagtttcagcgcatgtacagggagcgcaagaggtaccggcgcatgcaggctgcgtctctc
gtcgtccagtgcatgctacgagcgtacatggcccggcagaagtaccaggcgatgctgcag
gagcacaaaactatcattatccagaagagggtacgaggctggctggcccggctgcattac
aagaggtccctggaagccgttgtttaccttcagtgctgcatccggcgcatgagggccaga
cgggagctgaagaagctgaagatcgaggcccgctcggtggagcacttcaagaagctcaac
atcggcatggagaacaagatcatgcagctgcaacgcaaggtggatgagcagcacaaagac
aagaaagccatgacggagcgtctgaatagtctggcgaactcgtacgctgtggagagcgag
aagcttcgcaacgaagtggagcggctgcgactgaccgaggaggaggccaggaacaactcg
aaccgcatcaccaccctgctggaggagctggccaggctgaagaaggagctgtgtgacacg
cagagggacaagaggaccatcgaggagtgggctgacaaatacaaactggaaaccgagcag
ctggtggctgagctcaaggagcagaacttgcttctgaagacagagaaagatgacctgaac
cgcctcattcaagagcagaaccaggaaatgacagagaaaatggagaaggcgttagcagag
gaaaccaagcagctggagtgtgagctgaatgaagagcgctcccgatatcagaacctcctg
accgagcaccggcgcctggaggatcgccatgacgacctcaaggaggaaatgacgctcatg
gtgaacattcctaagccaggccacaggaggacagactccacgcacagcagcaatgagtct
gagtacacatacaactcagaattcgctgagtccgaggagagcgcacggggagctgaggat
gttactaaggctcctttggacatgtccctgttcctgaaactgcagaagagggtgacggag
ctggagcaggagaagcagtccttgcagaacgagttggacaagaaagaggagcaggcttac
cgagccagggccagggaggaagatgagcagaacagggcgagaggggcagagctggaatac
gagtctctcaagcgtcaggaactggactctgagaacaagaagctgaagaatgatttgaac
gagctgcgcaaagctctgtctgagaagtctcccccgggggtcacagcgccgggctcccct
gcctacaaggtagtcatggagcagcttaactcctccaatgaggagctggaggtccgcaag
gaggaggtgctcatcctccgctcccagttggtcagccagaaggaagccattcatcagaag
gagaacaagcaaaccatgactgaagccatgccctgcatggaggacgtgcacaagatgagg
gatgctggagaaataactcaagcatatctagccctgaaagaaagcaacagatcgccaaag
ttcacctctaagcctgttgcagtcagtgatctcatgagtaggataagatcacccccccaa
gactaccatgcgctgaatgaggatggagagctttggctggtttatgaagggttaaaggaa
accaacaggctgctggagtcccagctccagactctgaggaagagccacgagaatgagacg
gaggtgctgcgcgaggagctgcagagcgtcaaggaggacaacaacaggcagcagcagctc
ctggctcagaacctccagctgccccccgaggctcgcatcgaggccagcctgcagcacgag
atcaccaggcttaccaacgagaacctgtactttgaggaattatatgcagatgaccccacg
aagtatcagttctaccggatttcgctttacaaacggatcattgatctcatggaacagttg
gaaaaacaggacaagactgttcgcaaactaaagaagcagctgaaagtatttgcaaagaag
attggggagctagaagtaagcggtcagatggaaaatgtgtctccaggccagatcatcgac
gagcccacccaccctgtcaacattcccagaaaggagaaagatttccagggaatgctagag
tacaagaaggaggatgaatccaaactggtgaaaaacctcatcctagagctaaaaccacgg
ggtgtggctgtaaacctgattcctggcttaccggcctacatcctcttcatgtgtctcagg
catgcagattatgtgaatgatgaccagaaagtgcgcactttgttaacctcaactattaat
ggcatcaagaagatcttaaagaaaagaggcgatgactatgaaaccgtctctttctggctg
tctaacacttgccggttcctgcactgtttgaagcaatacagtggagaagagtcctttatg
aagcacaacaccccacgacagaatgaacactgcctctctaactttgacctggcagagtac
aggcaggtcctgagcgacttggccatccagatttaccagcaactcgtgaaggtcatggag
aacatccttcagccaatgatagtttcgggaatgctggaacatgagacgatccagggtgtg
tcgggagtgaagcccactggcttgcgtaagaggacctccagtattgcggatgaaggcacc
tacacgctggactccatcctgcgtcagcttaactccttccactccaccatgtgccagcac
ggcacagacccggagcttatcaaacaggtcatcaagcagatgttctacatcatcggggcc
gtcaccctcaacaacttgctgctacgcaaggacatgtgctcctggagcaaaggaatgcag
attaggtacaatgtgagccagcttgaggaatggctaagggacaagaatctaatgacaagt
ggtgctaaggagacactggagcctttgatccaggcagctcagctgctgcaggtgaagaag
aagacggatgaggatgcggaagcgatctgctcaatgtgcaatgctctttcaacagcacag
attgtaaaagtgctgaatctgtacactccagtaaatgagtttgaagaaagggtttctgta
tcgtttatacgtaccatacagatacgtttacgagaccggaaggaatctccccagttacta
atggacaccaaaaacatctatccagttacattcccattcaacccctcttcccttgcactg
gaaaccattcagatccccagcagcctcaacctgttattcctcactcgtgtctaa
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integrated database retrieval system
