Polyodon spathula (Mississippi paddlefish): 121299054
Help
Entry
121299054 CDS
T07273
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
KO
K08525
retinoid X receptor beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
pspa04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121299054
03320 PPAR signaling pathway
121299054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121299054
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121299054
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121299054
Nuclear receptors [BR:
pspa03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
121299054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
121299054
NCBI-ProteinID:
XP_041082482
LinkDB
All DBs
Position
24:22795512..22826281
Genome browser
AA seq
449 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPAAQRSPPLPPAAMTSSLNSPISSLGSPFSVISSSMGSPSLPS
TPSIGYGPISSPQINSTVSVSGLHAVSSSDDVKPPFGLKGMPAHSPGPMMSQKRLCAICG
DRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMG
MKREVVQDERQRTVQEERQRNKEKEGEVESTSGVNEEMPVEKILDAEMAVEQKTELHADG
TAGMANSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASF
SHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAI
ILFNPDAKGLSNPSEVELLREKVYASLESYCKQRYPDQQGRFAKLLLRLPALRSIGLKCL
EHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagccgagactctagaagtccagacagttcttcggtcagctctcctgcagcc
cagcgcagccccccccttccccccgctgccatgacctcatcactgaactctccaatcagc
agcctggggtctcccttctctgtcatcagctcctccatgggctcccccagcctgccaagc
accccctctattggctacggacccatcagcagcccccagattaactccacagtgagcgtg
tcggggctccacgctgtcagcagctcggacgacgtcaagcccccgttcggactcaagggc
atgccagcgcacagcccgggacccatgatgtcacagaaacgactctgcgcgatctgtggg
gacaggtcctcgggtaagcactatggtgtgtacagctgcgaaggctgtaagggtttcttc
aagcgcacagtacggaaggacctcacctacacctgcagagataacaaggactgcctggtg
gacaagcggcagaggaaccggtgccagtactgccgctaccagaaatgcctggccatgggc
atgaagagggaagttgtccaagatgaacgacaacgcactgtgcaggaggagaggcagcgc
aataaggagaaggagggagaggtggagtccaccagcggggtgaacgaggagatgccagtg
gagaagatcctggacgcagagatggccgtggagcagaaaacagagctgcatgctgacggc
acagccggcatggcaaactctcccaatgaccccgtcactaatatctgccaagcggctgac
aagcagctcttcacactggtggagtgggccaagagaatccctcacttctcggagcttccg
ctggacgaccaggtcatcctcctcagagcaggctggaacgagttgctcattgcctcgttc
tctcatcgctccatcactgtgaaggacggtatcttgctggcgactggtttgcacgtgcat
cggaacagcgcgcacagcgctggagtgggggccatctttgacagggtgctgactgagctc
gtctcaaagatgagagacatgcagatggacaagacggagctaggctgcctgcgagccatc
atactgttcaacccagatgcgaaggggctgtctaaccccagtgaggtggagctgctgaga
gagaaggtctatgcctccctggagtcctactgcaagcagagatacccagaccagcagggc
aggttcgctaagctcctcctccgtctgccagcgctgcgctcgattggtctaaaatgcctg
gagcacctgttttttttcaagctgattggagacactcccatcgacaccttcctcatggag
atgctggaggcaccacaccagctcacgtag
DBGET
integrated database retrieval system
