Polyodon spathula (Mississippi paddlefish): 121299071
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Entry
121299071 CDS
T07273
Symbol
bcam
Name
(RefSeq) basal cell adhesion molecule
KO
K06578
Lutheran blood group glycoprotein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121299071 (bcam)
CD molecules [BR:
pspa04090
]
Proteins
121299071 (bcam)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
C2-set_3
Izumo-Ig
C1-set
DUF3377
CD34_antigen
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
121299071
NCBI-ProteinID:
XP_041082512
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All DBs
Position
24:complement(18594847..18626025)
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AA seq
629 aa
AA seq
DB search
MEGKLARLLCVLVVAAAALQAGQAVVQVSVPQEVDAELGKSVSIPCTYSSGSKTSNVIVE
WFITERGGDRQRVAYRSSSDSGTDKNTELSGRVSVDQDSSLSLSAVEIGDERDFHCQITA
GPAGSGEGSAHLRVYSAPQTPEVSPQTKIISVTDLSVSEVSTCTSKNGNPAPKIIWYKDS
TPLPEVTESNDNMYMVPRVVKESSGLYTVTNTLYFKTSKEDKDSEFHCQVEYNMPGGRME
TKASPKFNLSLHYYTEEVTFAVVTPKKVKEGDDVILKCKADGFPEPEYELTKIQSDGSIV
EKGTFSGTFTLRSVTRDDGGKYRCEALDFDSPAEVKLKKEVTLLVHYLDPVTVSPSSSVS
VPLGGSLELGCTTTGSKTPSFMWKKGSQVVSQSTPLVLKEVSFDAAGSYSCVASVPGVSG
LVKEANVTVTVTGKVQIVHLPYSGQVSKEGELLTLSCTAQGHPEPQISWTPAGLEAISSV
TGNKVTSTVTLPVTPMLVDSGVTCEASNEHGSSSKKFKVTIYKETPTVTPPVDTEVDPIH
KTANRQEQGGSSAAVIAVVVCVLLLLILVGFLYFLQKKGKLPCGRQGKEDIVNTEPNADE
IVVEMKSGKPNEEAGLLDSSGRQRPMRDQ
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaaactcgctcgcttgctctgcgtccttgtggtggcagctgcagccttgcaa
gccgggcaggccgtggtccaggtctctgtccctcaggaggtggacgcagagctggggaag
tctgtcagcatcccctgcacctactcctcaggcagcaagacaagcaacgtgatcgtggag
tggttcatcacggagcgcgggggggacagacagcgcgttgcctatcgcagctcctcggac
tccggcacagataagaacacagagctgtcaggccgggtcagtgtggaccaggactcctct
ctctctctcagcgctgtggagatcggggatgagagagactttcactgccagatcactgcg
ggaccggcggggagcggagagggcagcgcacacctgcgagtttactctgccccacagacc
cctgaagtcagcccccaaaccaagatcatctcagtgactgacctttcagtgtcagaggtc
agcacttgcaccagcaagaatggaaaccccgcccccaaaatcatctggtacaaagactcc
accccccttcctgaggtcacagagagcaacgacaatatgtacatggtgcctcgtgtagtg
aaggaatcgtctggtctctacaccgtcaccaacacactgtacttcaaaaccagtaaggag
gacaaagactccgagtttcactgccaggtggagtacaacatgccagggggtaggatggaa
accaaggcctcccccaaattcaacctgtccctgcactattacacggaggaagtgaccttt
gctgtggtgaccccgaaaaaggtgaaggagggcgatgatgtcattctgaagtgtaaggca
gacggtttccctgaaccagagtacgagttaacaaagattcagtcggacggcagcattgtg
gaaaagggcaccttctccggaacgttcaccctccgctcggtaacccgcgacgacgggggc
aagtaccgctgcgaggcgctggatttcgattcgcccgcagaggtcaaactgaagaaggaa
gtcactctgttagtccactatctggacccggtcactgtgtctccctccagctccgtctca
gttcctctagggggcagtttggagctgggctgcaccaccactggctcgaagacaccctct
ttcatgtggaagaagggctcccaggtggtctcccagtctactccgctagtcctgaaggag
gtctcgttcgatgcagcaggcagctacagctgtgtggccagcgtgcccggcgtctctgga
ctggtcaaggaggccaacgtcaccgtcactgttactggaaaagtccagatcgttcacctg
ccctacagcggccaggtatcaaaagaaggggagctcctcactctgtcctgcacggctcag
ggtcaccccgaaccccaaatctcatggacccccgctggactggaggctatcagctcagtg
acagggaacaaagtgaccagcaccgtgaccctgccagtgacccccatgctggtggacagc
ggggtcacctgcgaggccagcaacgagcacggctcaagcagcaagaagttcaaagtgacg
atctacaaagaaactccaacagtcactcctcctgtagatactgaagtggaccccatacac
aagacagcgaatcgtcaggagcagggaggcagcagcgcggcagtcatcgcagtcgtggtc
tgtgtcctgttgctcctcattctcgtcggcttcctctacttccttcagaagaagggcaag
ctgccctgcggccggcaggggaaggaagacattgtgaacacagagcctaacgcagacgag
atagttgtggagatgaagtctggcaaacccaacgaggaggcgggacttctggactccagc
gggcgccagaggccaatgcgagatcagtga
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