Polyodon spathula (Mississippi paddlefish): 121299089
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Entry
121299089 CDS
T07273
Name
(RefSeq) DET1 homolog isoform X1
KO
K10571
de-etiolated-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121299089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121299089
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121299089
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
121299089
NCBI-ProteinID:
XP_041082545
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Position
24:complement(14145068..14150922)
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AA seq
551 aa
AA seq
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MEDECPTLKPRRIQNQNVVHRLERRRVCSGRAGAHWYRVRCFHQNLFSNFTVVNVEKPPC
FLRKFSPDGQCFIAFSADQTSLEIYEYQGCQAAEDLLWGQEGETLANGNDQRSLDIRGRL
FERFFSLMHVTNVASNGEHLNRECSLFTDDCRYVLVGSAAYLPEEPHPHFFEVYRNNESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRAFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
IFQVTPEGTFLDVRTIGRFCYEDDLLTLSAVYPEAQAEGQPGFSRLYKEKTINSLKHRLM
VYLWRRAEQDGSATAKRRFFQYFDQLRQLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVMAVFENTSDELLELFENFCDLFRNATLHSDAVQFPCSASSNNFAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHVCV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagtgcccgaccctaaagccccgtcggatccagaaccagaatgtggtccac
cggctggagcggcggcgggtctgctcgggcagggccggggctcactggtatcgagtgcgc
tgctttcaccagaacttgttctccaacttcacggtagtgaacgtggagaagcccccctgc
ttcctgcgcaagttctccccagacggccagtgcttcattgccttctctgcagaccagacc
tcgctggagatctatgagtaccagggctgccaggcggcagaggacctgctctggggccag
gagggggagaccttagctaacggcaatgaccagcggtcccttgacattcgcgggcgcctc
tttgaacgtttcttttctcttatgcacgtcaccaatgtggcctccaacggggagcacctg
aatcgcgagtgcagcctcttcacggatgactgccggtacgtccttgtgggctcggcagct
tacctccccgaggagccccacccacacttttttgaggtgtaccgcaacaacgagtcggtc
acccctaacccccgctcccccctggaggactactccctgcacatcatagacctccacacg
ggccgcctctgtgacacccgcgccttcaagtgcgacaagatcatcctgtcccacaaccag
gggctctacctctaccgtaacatcctggcagtgctgtctgtgcagcagcagaccatccac
atctttcaggtgactccagagggcaccttcttggacgttcggacgattggacgattctgc
tatgaggacgacctcctgaccctgtcggctgtgtaccccgaggcacaggctgaagggcag
ccgggattctcgcggctctacaaggagaagaccatcaactctctgaagcaccggctgatg
gtgtacctgtggcggcgggcggaacaggacggcagcgccaccgccaagcgccgcttcttc
cagtactttgaccagctgcggcagctgcgcatgtggaagatgcagctactggacgagcac
cacctcttcatcaagtacaccagcgaggacgtggtcaccctgcgagtcacggacccctcg
cagccttctttcttcgtggtatacaacatggtgtcgacggaggtgatggctgtgtttgag
aacacgtcggacgagctgctcgagctctttgagaacttttgtgacctgttccgcaatgcc
acgctgcacagcgacgcagtgcagttcccctgctctgcctccagcaacaactttgcacgg
caggtccagcgcaggtttaaagatacgatagtgaacgccaagtacggcggccacactgag
gcagtgaggagactcctgggtcagctacccatcagcgcccagtcctacagcagcagcccc
tacttggacctctcgctcttcagctacgatgacaagtgggtgtctgttatggagcgcccc
aagacctgcggcgaccatcccatccggttttatgcccgggactcagggttgctgaagttt
aagatccaggcaggcctcttgggtcgccctatcaaccatgcggtacgtagactggtggct
ttcacattccaccccttcgaacccttcgctatctctgtgcagcgcaccaacgcagagtac
gtggtcaacttccacatgcgccacgtctgtgtctga
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