Polyodon spathula (Mississippi paddlefish): 121299098
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Entry
121299098 CDS
T07273
Name
(RefSeq) POU domain, class 5, transcription factor 3-like
KO
K09367
POU domain transcription factor, class 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121299098
03021 Transcription machinery [BR:
pspa03021
]
121299098
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121299098
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
121299098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121299098
NCBI-ProteinID:
XP_041082570
LinkDB
All DBs
Position
24:complement(20854499..20859050)
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AA seq
434 aa
AA seq
DB search
MTGRLVGQDVGRSFHLPADGLHLSQETGPQYFPDPFTSAQGYTYKGAEYGQVVPEDHSVT
NARIGAHGLPKAWYTFPGAEAWAHSGMVMPHGGGTGVYDSFKGGEGVKAEKESFLCHPWN
SCLLPPVPTSAAGGMLPCSSPVSSRTLAGNGGGHLGNLGAQGQLGAPLSPLDGSSESPPA
SSSPESEDGKGTSSDSGDEETPSAADLEQFAKELKHKRITLGFTQADVGLALGVLYGKMF
SQTTICRFEALQLSFKNMCKLRPLLERWLREVDTNENLQELCNLEQAAIQARKRKRTSIE
NNVKGTLESYFGKCPKPSAPEIAQIADDLNLEKDVVRVWFCNRRQKGKRNAFPGIEEYDS
STVQYSSIPTMALHNPMMPQGYGSSFATTLYVPQFHEGSRDVNGRTHSQSIMGWQEGQCL
FVLEGEFLEDIEDV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacaggacggttagttggacaagatgttggaagatctttccaccttcctgccgatgga
ctacacctcagccaggaaactggaccccagtattttccggacccttttacttcggctcaa
ggatatacctataaaggagcagaatatgggcaggtggtccctgaagaccactctgttacc
aatgcccgcataggggctcatggactacccaaagcctggtacactttccctggggctgaa
gcctgggcccacagtggaatggtgatgccacacggagggggcacaggggtctatgattct
ttcaaaggtggagaaggggtgaaagcagagaaggaaagtttcctctgccatccttggaac
tcttgcttgcttcctccagtccccacctcagcagcagggggaatgcttccctgcagcagt
ccagtgtcatctcggactctagctgggaatggtggagggcacttgggcaacttgggggct
caagggcagcttggggcaccacttagccccctcgatggaagcagtgagagccccccagcc
agcagcagcccagagagtgaagatggaaaagggacttccagcgatagtggagatgaggaa
acccccagtgcagcagatctggagcagtttgccaaagagctgaagcacaagagaataaca
ctgggattcacacaagctgatgtgggactggctctgggtgtgctttatggaaagatgttc
agccagacaacaatctgcaggtttgaggctctgcagctgagcttcaagaacatgtgcaag
ctgaggccgttgctggagcgctggctgagagaggtggacaccaacgagaaccttcaggag
ttgtgtaatctggagcaggctgctatccaggctcgcaaacgaaagaggacgagcatcgag
aacaatgtgaaggggacgctggagtcgtatttcggcaagtgtcccaagccctccgcacca
gagatagcacagatcgctgacgacctcaatctggaaaaggatgtggtccgtgtttggttc
tgcaaccgaagacaaaaaggaaaacgaaacgccttcccagggattgaggaatatgatagc
agtactgtgcagtacagtagtatccccaccatggccctccacaatcccatgatgcctcag
ggttacggctcatccttcgctaccactctctatgtcccccagttccatgaaggctcaaga
gacgtcaatgggcggacacactcccaaagcatcatgggatggcaagaaggacaatgcctc
ttcgtgcttgaaggcgagtttttggaggacattgaggatgtgtag
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