Polyodon spathula (Mississippi paddlefish): 121299117
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Entry
121299117 CDS
T07273
Name
(RefSeq) pro-interleukin-16-like isoform X1
KO
K22628
interleukin 16
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121299117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121299117
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Interleukins
121299117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Ezh2_MCSS_fung
Motif
Other DBs
NCBI-GeneID:
121299117
NCBI-ProteinID:
XP_041082600
LinkDB
All DBs
Position
24:12737130..12761407
Genome browser
AA seq
1553 aa
AA seq
DB search
MTLCSLGCFCIKVYSEHMLAWIVSAWSLRSQLKGEAMPERLFPLAGQGRGNPSADMPHSY
TNHKKKANGPAMKTERRSATGKTNRRSRKLGLISRSLILCNSKNSDEGSSPEEKYPDSAE
NEKDGGRERSERNPRVQVVSTTHSAEHKACDPQRTTGEHEEYAKKNMRRTFSIEESCIWK
LCVATGDEGLGIQISANDTSAVPNRGITVSHVMNGGAAHRDGRLHPGDEVLTVNGQSLTG
LSRHEAESVLQAATGLVDLVVSNKLMTCPVDENKGSLLCNRSTSVSASPTTDKENQQPQA
IITDKEKAGNDIPPKRNSTDMTGEGSNECNTEKSDNYPQTKLSCKRTRSNSTSVNPYWIG
DLDALIIKTPEMYNSNNTQGNPGFYGNRKALSQQLEFSNASAQVIARPTRSLSSAHLVNS
SSSVQAFVISNIVLMKGQGKGLGFSIVGGKDSMYGPIGIYVKTIFPGGAAAADGRLQEGD
EILELNGKSLHGLTHDEALKKFKQTKKGLLTLAVRTSLRIGASTSSSGVSHLCRSRSLSS
SATINSRGSCSSPVLADCSFLTSPAKPKDRIMMDITLHKEMGVGLGIGLCCVPSSEGYPG
IYIHTLSPGSVAHMDGRLRGGDEIIEINETVVHNMTLNEVYTVLSQCHPGPVQVIISRHP
DPKVSEQQLNEAIAQAVENSKLRKVKSQWSIEALKKNDPCSHGKQKCEKCLERSFSQLNN
RRSQKVMMRSSSDTSSDHRSPCSNGGSGFSNQQAGMKCRVHSVDVPMTAPQSTVAGSPGW
SVMENNPSPPHQDDYNIPNSKHCSQQSKDFIIKTARSSKPKPPPRRYFKQQEHSKEEHFS
DHAGVNGDSPNDWKPPSTKCQEAVSLVSEGIKTVHTNTVCVTSLSPGEAGHFSKTARDKP
LREEERNQSVGSPTNLSTGTKRPALRRQAHVDLFVAHHTQDPWVRISDSAEEQPSCAIMS
QENGQPDLNASTVHEKDAPDGAEAVKYSLNVKKGPPVAPKSVWVRQSLKGLKSGKLPATT
KPQDGSTPDPRSTFGVSLRNTSTKSNLSFKQKINSFETFSSPESTERGTKRIAPSLSLPL
VDKPPSRSDTTSAVNTACHAANKAAEVSPPGESKSAVEVTIPAAEPEVPSSLPPVSPLDG
PRRSSSTKTVPSSASLEPEENMVFKSPSQRTRSFPLATTPSSETCNLKSYDGESLCKILS
FSNQVSHALMRSMRSLPQSPSIWHSNPWSASPGSPQAAPDDDLSWADKTPGSPAVDLSHA
EKGFSVSLAEFRECTISMADEKREDGKRERTSSLSSSASAQSLISIIPAEEIKKMIEEVK
ALDEETLKQFEDIHVVILHKEEGTGLGFSIAGGIDLENKVTTVHRVFPNGLASQEGTIQK
GDELLSINGQSLKDVTHSEGTAILRQARMQKQAVIVICKSKESDTGNDESSESSLTTVEN
ACVAAAEDVGLDTITVELEKNAGGVGFSLEGGKGSIYGDKPLVINRIFKGGATEQSLGIQ
PGDELLQIQSASLQGLTRFEAWNIIKALPEGPIRAVIRRKTDVSKSETTAEEQ
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgacattgtgttctctggggtgcttctgcataaaggtctactcagagcatatgcttgct
tggattgtatctgcatggagtttaaggagtcagttgaaaggagaagcaatgccagaacgt
ctctttccattagctggccagggcagaggaaatccatcagcagacatgccgcacagctat
accaaccacaagaagaaggctaatgggcctgcgatgaagacggagaggagaagcgctaca
ggcaaaaccaacaggaggtcgcggaagcttgggctcatttccaggtcattaatactatgc
aattccaaaaacagcgacgaaggatcgagccctgaggaaaaataccccgattcagctgaa
aacgagaaagacggtgggagagaaagatcggaaagaaaccccagggtacaggtggtgtcc
acaacacactctgctgaacacaaagcttgtgacccacaaaggaccacaggagaacatgag
gaatatgccaagaagaatatgaggagaacattttccattgaggaaagctgcatctggaaa
ttgtgtgtggctactggcgatgaaggtctggggattcaaatctctgcaaatgacacctct
gcagtaccaaacagaggaattactgttagccatgtgatgaacggaggggcagcacataga
gatggtcgccttcatcctggagatgaggtgttgacagtgaacggacaatccctgactggc
ctctcaagacatgaggctgagtctgtgctccaggcagcaacagggctagtggatttggtt
gtttccaacaagttaatgacttgtcctgtggatgaaaataaagggtcgcttttatgtaac
agatctacctcggtttctgcatcaccaactaccgacaaggaaaaccagcagcctcaggca
atcatcactgataaagaaaaggctgggaatgacattcctccaaagagaaacagcacagac
atgactggggagggatccaatgagtgtaatactgaaaaatcagataattatccccagacc
aagttgtcttgtaaaaggactcggagtaattctactagtgtcaatccctattggattgga
gatttagatgcccttatcattaaaacaccagagatgtataatagtaacaacacacaggga
aatccaggtttctacggcaacaggaaggcactctcccagcagctggagttttctaatgca
tctgcccaggttattgcaagacccactcggtctttaagctcggcacacttagtgaactca
agcagcagcgtgcaagcctttgttatttctaatatcgttctgatgaagggtcaaggcaag
ggtttagggttcagtatagtcggtggaaaggacagcatgtatggaccaataggaatctat
gtcaagactattttcccaggtggagcagcggcagctgatggaagattacaagaaggagat
gaaatactggagttgaatggcaagtcactgcatggattgacccacgatgaggccctgaag
aaatttaagcaaactaagaagggcttgctgacgctggctgtgcggaccagcctgcggatc
ggagcctcgaccagctcctccggcgtctcccacctgtgccgctcgcgctcactcagctcc
agcgccaccatcaacagccggggaagctgctccagcccagtgctggcagactgcagcttc
ctaaccagcccagccaagcccaaagacagaatcatgatggatatcactttgcacaaagaa
atgggtgtcggcctggggattgggctgtgctgtgtcccctccagtgaaggctaccctggt
atttacatccacaccctctcccctggctctgtggcccacatggatggaagactgaggggt
ggggatgaaatcattgaaatcaatgaaacagtggttcacaacatgactctcaatgaggtt
tacacagtcctcagccaatgccacccggggcctgtccaggttattatcagtcgtcaccca
gatccaaaggtttcagaacagcagctaaacgaagccattgcacaagctgttgaaaacagc
aaattgagaaaagtcaagagtcagtggagcatagaagccctaaagaaaaatgatccatgc
tctcatggaaagcagaaatgtgaaaaatgcttggagagaagcttcagtcaactgaacaac
aggagatcccagaaggtgatgatgcgctcaagcagtgatacaagctccgaccacagatca
ccctgctcgaacgggggctcaggcttctcaaaccagcaagctggcatgaagtgcagggtc
cacagtgttgacgtgcccatgacggctccgcaaagcactgtggctggatcgccgggctgg
tcggttatggagaacaacccatcccctcctcaccaagacgattacaacatacctaacagc
aaacattgcagccaacaatctaaagacttcattatcaaaactgcaagatcctccaagcca
aaacccccaccgaggaggtactttaaacagcaagagcattcaaaggaagagcatttttct
gaccatgcaggtgtgaacggagactcacccaacgactggaaacctccttctacaaagtgc
caggaagcagtgagcttggtgtcagaaggaattaaaacggtccacactaacactgtctgc
gtgacttcgttatcaccaggggaggctggacacttctctaaaactgcaagagataagcct
ttacgagaagaagaaagaaaccaaagtgttggttctcccacaaacctctctacgggaact
aaaaggccagcattaagaagacaagctcacgtggatctctttgtggctcatcatacacag
gacccgtgggtaaggatttcagacagtgctgaggaacaaccaagctgtgccatcatgagt
caggagaatgggcaaccggacctgaacgcctccaccgtgcatgaaaaggatgcacctgat
ggagctgaagctgtaaaatattccctgaatgttaagaaaggtcctccagtggcaccaaag
tcggtttgggttcgccagagcctgaaagggttaaagagtggaaaactgccagcaacaacc
aaacctcaggacgggagcacaccagatccaagaagcacgtttggtgtgagtttaagaaat
acttcgaccaaatccaacttgtcattcaaacagaaaattaactcttttgaaacattctct
agccctgaatctaccgaaagaggaactaaaaggattgctccgtcactgtctttacccttg
gtagacaaacctccaagcagaagtgacacaacttcagctgtcaacactgcttgtcatgct
gccaataaagcagccgaagttagcccccctggtgaaagcaagtcagcagtagaggtgact
atcccagcagcagagccagaggtaccttccagtcttccgccagtgtctccattggatggc
cccaggagaagcagcagcacaaaaactgtgccctcctcagcatcgctggaacctgaagaa
aacatggtgttcaagtcccccagccaacggacaagaagctttccattggctaccacccca
tcctccgaaacctgcaacctgaagtcctatgatggagaaagcctctgtaaaattctctcg
ttcagtaatcaagtatcgcatgcgttaatgaggtcaatgcgttcccttcctcagtcccca
tccatctggcacagcaacccttggtctgcttctccaggatccccccaagcagctcctgat
gatgacttgtcctgggcagacaagacccctgggtcacctgctgttgacctgagccatgct
gagaagggattttctgtcagcctggcagagttcagagaatgcacgataagcatggcggac
gagaagagagaggacgggaagagggagcgcacctcgtccctctcctcctcagcctcggcc
caatcactcatctccatcattcctgcagaggagatcaagaagatgatagaggaggtgaag
gctctggatgaagaaacgctgaagcaatttgaagacattcatgttgtaattttgcacaaa
gaagaaggcaccgggctgggattcagtattgctggtgggatagaccttgaaaataaagtg
accacagtacacagggtatttcccaacggactagcatcgcaggaaggaaccattcagaaa
ggggatgagctgttatccattaacgggcagtcccttaaagacgtgacgcacagcgagggc
acagccattctccggcaggcgaggatgcagaagcaggccgtcatcgttatttgcaagtca
aaggagagtgacacaggaaatgacgagagcagtgaaagcagcttgaccactgttgaaaat
gcttgtgtggcagctgcagaggatgtgggtttggatacaatcactgttgagctggagaag
aacgcagggggtgtggggtttagtttggaaggaggcaaagggtctatttatggagacaag
ccccttgtcatcaacagaatctttaaagggggcgctactgaacagagcttggggatccag
ccgggcgatgagttactgcagatccagagcgcttccctgcagggactgacccgtttcgaa
gcctggaacatcattaaagccctaccagagggtcccatcagagctgttatcagaagaaaa
actgatgtgagcaaatctgagaccacagcagaagaacaataa
DBGET
integrated database retrieval system
