KEGG   Polyodon spathula (Mississippi paddlefish): 121299145
Entry
121299145         CDS       T07273                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121299145
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pspa01009]
    121299145
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pspa03021]
    121299145
Protein phosphatases and associated proteins [BR:pspa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121299145
Transcription machinery [BR:pspa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     121299145
    Little elongation complex (LEC)
     121299145
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing Med19 DUF6399
Other DBs
NCBI-GeneID: 121299145
NCBI-ProteinID: XP_041082649
LinkDB
Position
24:15741225..15773404
AA seq 609 aa
MAALREDRRYGLSCGKINKNTPNKTLYHVKLTDTAIRALEAYQNLKGSLPNQPVICFQGN
QGYIKIPAPSSDSPGALRLFSFYLSSDSKDKPQASFDCIHQYVNGLGREQLESQGSIQDK
ITVCATDDSYQMTRERMSQVEKETWSRAAIEIKPGSTYRSKCVKVQKRHGPAPVLDSFPF
RKHSPPSPVLAVKRSSTSSIVPQRTLRDRIIHLLALKPYKKPELILWLEREKANPKDKAD
LAPVLDAVAKVNSKENSYTLKDEYYKHVQRDWPGYTEEEKQLLHRLLLRKLQPTNISQPR
SFQSKQPFHKSSGDSPSHCSPIKNPAVKRPVPSDPPESLANKKQKVLDQNLHQPITNGLR
TPPAAHGTTATVNSSLHVKTEFQRTSNVCESQNGFLPQHSYGDSSVTNKSQEYQDLKPAQ
LNSLRTEYSLKEDEEISGSQHKKKKSKKHKEKERERLKEEGGENAWPERSPDLKHNQENL
KERANTPITPSTPAGIPDYLVKYNTITTPEQRQNYKEDFCDEYDEYRDLHARIGSVTEQF
VQLGSKIKTLSPGTQEYKVIEDQIFGEYRNYKKKCPGYWEEKKRCKYLHQKLSHIKSLIL
DYDKNHMPL
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggcagccctgagagaggatcgtcgatacgggctctcctgcggaaaaattaataaaaac
accccgaataaaacactttaccacgtcaagctcaccgacaccgcaatcagggcactcgag
gcatatcagaatctcaagggttccttaccaaatcagcctgttatctgcttccaggggaac
caagggtacatcaagattccagctccttcctcggactctcccggcgctctgcgattgttc
tctttctacctgtccagtgatagcaaagataaacctcaggccagctttgactgcatccac
cagtatgttaatggcctgggtcgagagcagctggaaagccagggcagtattcaggataag
atcacggtatgtgccactgatgactcctaccagatgacccgggagcgaatgtcccaggtg
gagaaggagacgtggagccgggcagctatagaaatcaagccaggatcgacctatcgaagt
aaatgtgttaaagttcagaagaggcacggcccagctccggtgttggacagctttcctttc
cgtaaacactctcctccgagtcccgtgctggctgtgaagaggagcagcacctccagtatt
gtccctcagagaactctccgagaccgcatcattcacctgctggccttgaagccgtacaag
aaaccggagctgatcctgtggctggaaagggaaaaagccaacccaaaggacaaagctgac
ctggcccctgtgttagatgcagttgcaaaggtaaactctaaggagaacagctacactcta
aaagatgagtactataagcatgtgcagagggactggcccggctacactgaagaggaaaag
cagcttcttcacaggcttctattgaggaagctgcagccaacaaacattagccaacccagg
agtttccagtcaaagcaaccattccacaagtcctctggggattctccttcacactgcagc
cctatcaagaatcctgcagtgaaacgcccagtgccttcagatcccccggagagtcttgca
aacaagaaacaaaaagtattggatcagaacttgcatcagccaatcacaaatggacttcgc
acgcctccagccgcacacggtactactgccacagtgaactccagtctacatgtaaaaacg
gaatttcagaggacaagcaatgtttgcgagagccaaaacggcttccttccacagcacagc
tatggcgattctagcgtcacaaacaaaagccaggagtaccaggacctcaagccagcacag
ttgaactctttacggaccgagtactcgctcaaagaggacgaggagatctccggcagccag
cacaaaaagaagaagtccaaaaagcataaagagaaggagagggagaggttgaaagaggaa
gggggggagaatgcgtggcctgaaaggagccctgatctcaagcacaatcaggagaatctc
aaagaacgtgcaaatacacccatcactccttccaccccagcaggaatacctgactatttg
gtaaaatataacacaataacaactccagaacagcgtcagaactacaaagaggacttttgc
gacgagtatgatgagtacagagacctccatgcgaggatagggagtgtgactgagcagttt
gtacagctgggatccaaaataaagaccctgtccccggggacacaggaatacaaggttatt
gaagaccaaatatttggggaatacaggaactataagaagaaatgtcctggctattgggaa
gagaagaagcgatgcaagtatttgcaccagaagctgtcgcacattaagagcctaatactt
gactacgacaaaaaccacatgcctttgtaa

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