Polyodon spathula (Mississippi paddlefish): 121299160
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Entry
121299160 CDS
T07273
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121299160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121299160
Enzymes [BR:
pspa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
121299160
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121299160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
121299160
NCBI-ProteinID:
XP_041082680
LinkDB
All DBs
Position
24:7245272..7250114
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AA seq
311 aa
AA seq
DB search
MPKGQELHLASLFVSLICAGVVFSGPVEKSEVSKNSKVPFTCDAYCITGTSRGKEVRLTL
TPIKEEGEPQASPGGKACQPVHIVFRFGMSDFFRFTAGSEMPKHAHLRFYANETPRRALS
FVDVRRFRSWEPNGDWQTDSGPCIMFEYQSFRANVLSNLSDRAFDETISEAMLNQNFFNG
IGNYLRAEILYRLKIAPFMKARTVLGGLFPKKRELPEVKPEQGQCQPHQAVRGTIPRNQM
ITFQAWLQCYYVPGMKSLRDHNGRTIWFQQGVKEEPPAKGIKKEKGGVQKRVKSHDESKK
MREQEKGLKEQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagggacaggagctgcatctggccagtctgtttgtgagcctcatctgtgctggg
gtggtgttctctggaccagtggagaaatctgaggtcagtaagaatagcaaggtccccttc
acctgtgatgcctactgcatcacagggacctcccggggcaaggaggtccgactgaccctg
acccccatcaaggaggagggggaacctcaggccagtcctgggggtaaggcctgccagccc
gtgcacattgttttccggtttgggatgtcagacttcttccgattcactgctgggagcgag
atgcccaagcacgcccacctgcgcttctacgccaatgagacgcctcggagagcgctgagc
ttcgtggatgtcaggcgattcaggagctgggagcccaacggggactggcagactgacagc
gggccctgcatcatgtttgagtaccagagcttcagggctaacgtgctgtcaaacctgtcg
gatcgagcttttgacgagacaatctctgaagcgatgttgaaccagaacttcttcaatggg
atcgggaactacctgcgagccgagatactgtacaggctaaagatcgccccctttatgaag
gcaaggactgtcctgggcgggctgtttccaaagaaaagggagttgccggaagtgaaacca
gaacaagggcagtgccagccacatcaggcggtaaggggtacgatcccgagaaaccagatg
attacgttccaggcctggctgcagtgttactatgtcccagggatgaagtctctgagagat
cacaatggcaggaccatctggttccagcagggagtcaaagaagagccaccagcaaaggga
attaaaaaagagaagggaggtgtgcagaagagagtgaaaagtcatgatgaaagtaagaag
atgagagaacaagagaaagggctcaaggagcagtga
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