Polyodon spathula (Mississippi paddlefish): 121299181
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Entry
121299181 CDS
T07273
Name
(RefSeq) beta-hexosaminidase subunit alpha-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00511
Other glycan degradation
pspa00513
Various types of N-glycan biosynthesis
pspa00520
Amino sugar and nucleotide sugar metabolism
pspa00531
Glycosaminoglycan degradation
pspa00600
Sphingolipid metabolism
pspa00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pspa00604
Glycosphingolipid biosynthesis - ganglio series
pspa01100
Metabolic pathways
pspa04142
Lysosome
Module
pspa_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121299181
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
121299181
00513 Various types of N-glycan biosynthesis
121299181
00531 Glycosaminoglycan degradation
121299181
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121299181
00604 Glycosphingolipid biosynthesis - ganglio series
121299181
00511 Other glycan degradation
121299181
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121299181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121299181
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
121299181
Chaperones and folding catalysts [BR:
pspa03110
]
Intramolecular chaperones
Others
121299181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
121299181
NCBI-ProteinID:
XP_041082724
LinkDB
All DBs
Position
24:complement(6662717..6673796)
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AA seq
562 aa
AA seq
DB search
MAMFKNRDPSWNAPEVSQSFLGDVLQLSCAALFLLAIVVPPAQGVWPLPQNLTSSAERYS
LSPREFNFLYDKGSAVQPGCTILDTAFKRYFRIAFSGYSGGKPLTGNEKSGCVSPGGSSC
GSAPLRALVVNVQKGGCDGFPDLNSKEDYKLSIADGLGSLSAVSVWGALRGLETFSQLVY
QDQEVTYYINKTDVVDFPRFAHRGLLLDTSRHYLPVRSILETLDAMAYNKFNVFHWHIVD
DPSFPYQSPTFPNLSSKGAFHPQTHIYTMTDIKRVIEHARLWGIRVIPEFDTPGHTESWG
KGQPGLLTTCYKGSVPSGTFGPVNPMLNTSYQFMSKLFDEISSVFPDSYLHLGGDEVSFT
CWKSNPDIQQFMKKMGFGTNYRKLESFYIENLVKIVTALNKNSIVWQEVFDNAVKVPADT
VVHVWKGSKKQYSQEMSSVTAGGFKVLLSAPWYLNAIRYGQDWKNAYKVEPLGFNGTAEQ
KKLVMGGEACMWGEYVDATNLTPRLWPRAGAVGERLWSDEAQTSNVDTAYNRLAEFRCRL
LRRGIRAQPLFVGYCDHEYEGI
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttcaaaaacagggatccttcttggaatgcccccgaagtaagccagtctttc
ctcggtgacgttcttcagctgtcctgtgccgctctgtttttgctggcgatcgttgttccc
ccggctcagggagtgtggccactgccacaaaatctaacctcttctgcagagagatattcg
ctcagtcctcgagaattcaactttctatatgacaagggttctgcagtccaaccgggatgc
acgatcctcgatacggctttcaaacgttacttcaggatcgccttctccggatacagcggt
ggaaaacccctaacagggaacgagaagtcgggttgcgtgtctccaggtgggtcctcctgt
ggtagtgcacccctcagagctctggtggtgaatgtgcagaaaggtggttgtgatggattt
ccagatctcaattctaaagaggactataagctcagtattgctgatggattgggaagccta
tctgcagtgtcggtatggggagcgctcagaggcctggagacattcagccagcttgtttac
caggaccaagaagtaacttattacattaacaagacagacgtggtagatttcccccggttt
gcacaccgaggactcctactggacacatccagacactacctacctgtgcgctccatcctg
gagactctggatgctatggcctacaataagtttaatgtgtttcattggcacatcgtggat
gacccctcctttccctaccagagccccaccttccccaacctcagcagcaagggtgccttc
cacccccagactcacatctacaccatgaccgacatcaagcgggtcatagaacatgcccgg
ctgtgggggatcagagttattcccgaatttgataccccggggcacacagagtcctgggga
aaaggacagccaggtttgctgaccacgtgctacaaagggtcagttccctctgggacattc
gggcctgtcaacccaatgctaaacaccagctaccaattcatgagcaagctgttcgatgaa
atcagctcggtgtttccagactcctacctgcatctgggaggggatgaagtcagcttcacc
tgctggaaatccaacccagatatccagcaatttatgaaaaaaatgggatttgggaccaac
tacagaaaactagaatctttttacattgagaacctggtgaagatcgtaactgcgctaaac
aagaactcaattgtgtggcaggaggtgtttgacaatgcagtgaaggtccctgcagacacg
gtagtccatgtgtggaaggggagtaaaaaacagtacagccaggagatgagcagcgtcaca
gcagggggcttcaaggtcctgctgtcggctccctggtacctaaacgccattagatacggg
caggattggaagaatgcctacaaagtagaaccgctcggcttcaatggtacggctgagcag
aagaagctggtgatgggtggagaggcgtgcatgtggggagaatacgttgatgcgaccaac
ctgacacccaggctgtggccgagagccggtgctgttggagagagactgtggagcgatgaa
gcacagacctctaacgtggacacggcgtacaacaggctggcagagtttcgctgcaggctg
ctcaggcgtggaatccgcgctcagcccctgtttgtgggttactgtgatcacgagtatgag
gggatctga
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