Polyodon spathula (Mississippi paddlefish): 121299186
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Entry
121299186 CDS
T07273
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121299186
Chaperones and folding catalysts [BR:
pspa03110
]
Heat shock proteins
HSP100
121299186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_7
AAA_5
Sigma54_activat
Mg_chelatase
AAA_22
AAA_14
AAA_16
Sigma54_activ_2
IstB_IS21
RuvB_N
NACHT
TsaE
ResIII
nSTAND3
DEAD
T2SSE
AAA_25
AAA_18
ABC_tran
AAA_23
TIP49
MCM
AAA_29
PduV-EutP
AAA_28
DUF5795
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
121299186
NCBI-ProteinID:
XP_041082741
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Position
24:complement(12055079..12065592)
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AA seq
624 aa
AA seq
DB search
MSCACSSAARLIINSAHKGIACSRFHLYTLGRPGISEVHLRRRVPVRSFSETAVYFASKD
GTTKDGSGDGSKKSIEGGSGKKSTGSGGKGGNQLRCPKCGDPCTHVETFVSSTRFVKCEK
CHHFFVVLSETDSKKSLNKEPESAAEAVKMAFQQKPPPPPKKIYAYLDKYVIGQSYAKKV
LSVAVYNHYKRIYNNIPASMRQQAEVEKPAALTPRELEMRRREDEYRFTKLLQIAGISPH
GNALGASMQQQINQQMPQEKRGGEVLDSTNDEIKLEKSNILLLGPTGSGKTLLAQTLARC
LDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYGVEKAQQGIVFLDEVDKIGSVPGI
HQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRI
ISRRKNEKYLGFGTPSNLGVGRRAAAAADLANTSGEGDTVQEIEEKDHLLRNVEARDLIE
FGMIPEFVGRLPVVVPLHSLDEETLVRILTEPRNAVVPQYQALLGMDKCDLNITEGALKA
IARMALERKTGARGLRSIMEKLLLEPMFEVPNSDIMAVELTKEVVEGKSLPIYIRAPAKE
STEEEYDSGVEDDSWPRQADAANN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgcttgttcgtcggcggcgaggctgatcataaattcagcccataaaggcatt
gcttgctcacgctttcacctgtataccctgggaagaccggggatttctgaggttcatttg
agaaggagagttcccgttaggtcattttcagagactgcagtgtattttgcttcaaaagat
ggaacaaccaaagatggatctggggatggtagcaagaaatctattgaagggggcagtggc
aaaaaatccacaggctctggaggaaaaggcggaaaccagctgcgttgcccaaagtgtggg
gacccgtgcactcatgtcgagacatttgtttcttcaacccgctttgtaaagtgtgaaaaa
tgtcatcacttttttgtcgtgctgtcggaaacagactcgaagaagagtcttaataaagag
ccagaatcagcagctgaagctgttaaaatggcattccagcagaaaccaccacctccaccc
aaaaagatctatgcctacctggataagtacgtgattgggcaatcctatgccaagaaagtg
ctttcagtggctgtgtacaatcactacaagcgtatttataacaatatcccagcaagtatg
agacagcaggcagaagtggagaaaccagctgctctgacacctagagaattagaaatgaga
agacgggaggatgaatacagatttacaaagctgcttcagattgctgggatcagtccacat
ggtaacgcgctcggagcgtcaatgcagcaacagattaaccagcagatgcctcaagagaaa
cgaggaggcgaagtgctggattcaaccaacgatgaaattaaattggagaaaagcaacata
ttgcttcttggcccaacaggatcaggtaaaactctcttggctcaaacccttgccagatgt
cttgacgttccctttgctatctgtgactgcaccaccttgacccaggcaggatatgttggt
gaagatattgagtctgtcattgcaaaactgcttcaggacgctaactacggggttgaaaaa
gcacagcaaggaattgtcttcttggatgaagtagataagattggcagtgtgcctggcatt
caccagttacgagatgtgggtggggaaggagttcagcaaggtttattaaagcttttggaa
ggtacaattgtgaatgttccagaaaagaattctagaaaattaagaggagaaaccgttcaa
gttgacactaccaacatcctatttgtggcttctggggcatttaatggacttgataggata
ataagcagaaggaaaaatgaaaagtatctgggatttggtactccgtcaaacctaggagta
ggcaggagggctgcagcagctgctgacttagcaaacacaagtggagaaggggacactgtg
caggaaatcgaagaaaaagatcacttgctccgcaatgtcgaggccagggaccttattgaa
tttggaatgattccagagtttgtgggacgtctcccagtggtggttcctttgcacagcctg
gatgaggaaactctggttcggattcttactgagcctcgcaatgctgtagttccccagtac
caggcattgttaggcatggacaagtgtgatctcaatattactgaaggtgccttgaaagcc
attgccagaatggccttggagaggaaaactggtgctcgtggcctaagatcaatcatggag
aaactgctgctggagcccatgtttgaagtgccaaattctgacatcatggccgtagaacta
accaaggaagtagtggagggaaaatcgcttcccatatacattagggcccctgctaaggaa
tcaacagaagaggagtatgattcaggagttgaagatgacagctggccacgacaggcagat
gcagccaacaactaa
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