Polyodon spathula (Mississippi paddlefish): 121299228
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Entry
121299228 CDS
T07273
Name
(RefSeq) ras-related protein Rab-27A-like
KO
K07885
Ras-related protein Rab-27A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121299228
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pspa04031
]
121299228
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab GTPases
121299228
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab3/27 [OT]
121299228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
TPP_enzyme_M
AAA_24
DUF5040
Motif
Other DBs
NCBI-GeneID:
121299228
NCBI-ProteinID:
XP_041082813
LinkDB
All DBs
Position
24:complement(10484297..10497534)
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AA seq
222 aa
AA seq
DB search
MSDGDYDYLIKFLALGDSGVGKTSFLYQYTDGKFNSKFITTVGIDFREKRVMYKSGPEGN
SVRGQRIHIQLWDTAGQERFRSLTTAFFRDSMGFLLLFDLTNEQSFLNVRSWMSQLQTHA
YCENPDIVLCGNKCDLDDQRAVKEEEARELADKYGIPYFETSAANGHNVSKAVDALLDLI
MKRMERCVDKSWIPDGVVRSNGHGSTERLSDSKDKDQGKCNC
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatggggactatgattacctcatcaaattcttagctctgggagactcgggcgtg
ggaaagaccagcttcttataccagtacacagatggaaagttcaactccaagtttatcaca
acggtgggcatagacttcagagaaaaaagggtgatgtataaatctggcccagaggggaat
tctgtcagagggcaaagaatacacattcagctttgggacacggcgggacaggaaaggttt
cgaagcttaacaacagctttcttcagggattctatgggctttcttttgctatttgatctc
acaaatgagcaaagtttccttaacgttagaagctggatgagtcagttacagacgcatgca
tattgtgaaaacccagacattgttttatgtggcaacaaatgtgatctggacgaccagaga
gcggtgaaggaagaggaagccagggagcttgctgataaatatgggattccttactttgaa
acgagtgcagccaacgggcacaatgtgagcaaagcagtggacgctctcctggatctcatc
atgaagcggatggagcggtgcgtggacaagtcgtggatccccgatggggtagtgcgctcc
aacggccatgggtctacggagcggctcagtgacagcaaggacaaagaccagggcaagtgc
aactgttaa
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