Polyodon spathula (Mississippi paddlefish): 121299254
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Entry
121299254 CDS
T07273
Name
(RefSeq) putative nuclease HARBI1 isoform X1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121299254
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Gene silencing
Transposable elements
121299254
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
121299254
NCBI-ProteinID:
XP_041082852
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Position
24:15695941..15699587
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AA seq
406 aa
AA seq
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MLFCFSLPRPCTVQHTHIRCGCFRPGVVCAVFTKEAEPVDFCKIMSDLMVVLAALNSRKK
QRRFYPRNRVYRPRISFLSLTEEQVFDRFRLNKQFIYDLCEELKGDLECHRNSNYALPVP
VKMTSALTFYATGSFQNAASGSTGISQASMCKSLSEVTEALVRRVKKYICFPMSPGQMQK
TKEEFYKVTQFPNVLGVIDCTHVGIRARTENEPAFRNSKGFHSVNVQVVCDAKNIITNVL
ANHPGCADDAYILSKSRLTEIFETEITSNCWLVGDSDYDLKPWLMTPIPNPESPAEHRYN
EAHQLTHAVIDKTKSILKTRFRCLDRSKGVLQYSPKKVCQIFLACCVLHNIATQHNILVD
VDEGMETPNEDEDLSPVLDEEEELPEENASSEAASIRMELVREHFS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgttattttgtttctctcttccaaggccttgtacagtccagcacacacacatacgctgt
ggctgtttccgacctggcgtggtctgtgctgttttcaccaaagaagctgaacctgtggac
ttctgtaaaataatgtctgaccttatggtggtactggctgcactgaattcgagaaaaaaa
cagaggaggttttatccccgaaacagagtttaccggcctcggatatcctttctcagtctg
actgaagaacaagtctttgaccgctttcgtctgaataagcagttcatatatgacttgtgc
gaggagttaaagggggatttggagtgtcaccgaaacagcaattatgctttgcccgtgccg
gtaaaaatgacttctgccctcacgttctatgccaccggtagtttccagaacgcggccagc
ggctcgactggaatcagtcaggcgtctatgtgtaaaagcctctctgaggtcacagaggcc
ttggttagaagagtgaagaagtatatctgcttccctatgagccctgggcaaatgcagaaa
accaaagaggagttttacaaggtcacgcagtttccaaacgtcctgggtgttattgactgt
acacacgttggcatcagggcccgcaccgaaaacgagcccgcttttagaaactccaaggga
ttccactcggtgaacgtgcaggtagtgtgtgacgccaagaacatcataaccaacgtcctt
gcaaaccaccctgggtgcgctgacgacgcttacattttatcaaagtctcgtttaacagag
atatttgagacggaaattaccagtaactgctggcttgttggtgacagcgactatgacttg
aagccttggttgatgacccccattcctaaccccgagagtccagcggaacacaggtacaac
gaggcacaccagcttactcatgctgtcattgacaagaccaagagcatcttaaagactcgg
ttcaggtgcctggatcgttctaaaggggttctccagtacagtcccaaaaaggtctgtcag
atatttttggcttgctgcgttctgcacaatatagcaactcagcacaacatcttagtagat
gtcgacgaaggcatggaaaccccaaacgaggacgaggacttgagcccggtactggatgaa
gaggaagagctgcctgaggaaaacgcctcgagcgaggctgcaagcatcagaatggagctc
gttagagaacatttctcatag
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