Polyodon spathula (Mississippi paddlefish): 121299278
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Entry
121299278 CDS
T07273
Name
(RefSeq) unconventional myosin-Vc-like isoform X1
KO
K10357
myosin V
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121299278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121299278
04131 Membrane trafficking [BR:
pspa04131
]
121299278
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121299278
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121299278
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121299278
mRNA cycle factors
P-body specific factors
121299278
Membrane trafficking [BR:
pspa04131
]
Others
Actin-binding proteins
Myosins
121299278
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121299278
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121299278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Csm1_N
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121299278
NCBI-ProteinID:
XP_041082884
LinkDB
All DBs
Position
24:complement(9939238..9963969)
Genome browser
AA seq
1743 aa
AA seq
DB search
MALAELYTKFNRVWIPDPEDVWKSAEITKDYKPEENVLDLLLEDGTELKYPLDSVTKDLP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAINPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYF
ATVSKSGSKTHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMR
TYLLEKSRVVFQSENERNYHIFYQLCASANQPEFKNLKLVSADEFRYTCMGGKMCIDGVD
DRADMIETQRTFSLLGLKEDFQMDVFKVLAAVLHLGNVEIKGISDDRSSVNLSDKHLAVF
CGLLNISPDGVSRWLCNRKIITASETVVKPMPKLRAINARDALAKQIYAHLFNCIIDRIN
KSLQFPGKKHTFIGVLDIYGFETFETNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWMLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGKDENWLQKLYNNYLNKNPLFEK
PRMSNQSFVIQHFADKVEYRCHGFLEKNRDSMYEELINILKASKFDLLANFFQEEEPTFP
FSKSINFKAATPGIKPSNKQLRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPF
EYDSKRVVQQLRACGVLETIRISAQSYPSRWTYTEFYSRYSILMTQQEVTLNDKKQTCKT
VLQRLIHDSNQYKFGRTKIFFRAGQVAYLEKLRSDRLRGACITIQKNLRGWTQRKKYLRM
REAAIIIQQYVRGKRAIRQTVSAATLKQGWAAIVIQKHCRGFLVRRVWQLIQVATVTIQA
FARGWLARIRFKKILQEHKATILQKHTRAWLARRRFQSIRRVVLNVQLSYRVQRLQKKLE
DQNKENHGLLERLTGLASAHSHDVDKLQKLEATLKKSTAQKMMFEEDLKKHKEETKQVIT
QLQTHNAILTEEKLKLEKKLQEKTQEMKDNVDDIRKKLFEDLAGVERERKILENGFEIQK
DDYEKQIEALKEEMKCLREEKIQLQQQVQEEFLINDGLKQDIAQLTNQAKVIPDLRKEIV
VLETQKKEQDKQFKEQMQETRAKMSEVTRQLLRGLNEEELLCRLSKEDMEQINEDGELLF
AYEGLKKAIRVMENHFQAQKESYEKEIESLNYKAEHLQHETDHLQKLFREENNMNDNIRQ
EVKRLASENMAIPQYKQQISELQRKNQELDNRLKDQAIELRGNMEVIACELRNTLEEEGS
QRRILELQKETYEKEMQELKEKVAEKQDENDQLQKQFQAESQAKNKLRQEASRLIAENMD
FEEQVDMKDRLIKKLQNQIQAFRTIEKVNQVQEPVAPKEYLGMLEYKKDDESRLIKNIIL
DMKPRGVVVNMIPGLPAHILFMCVRHADYLNDADQLKSLMNSIINGIKQVIQDHPEDFET
LSFWLSNTCHLLNCLKQYSGEEEFMKYNSPHQNKNCLKNFDLSEHRQILSDLAIRIYQQF
INVMESGIQPMIVPGMLEHESLQGISSMKPTGFRKRSTSIYEDTEVYTISSILQQLGYFY
STMCQHGMDPELIKQAVKQLFYLITAVTLNSIFLRKDMCSCRKGMQIRCNISYLEEWLKE
KNLQGSCAIDTMEPLSQTAWLLQVNKSTDEDAKEICERCSGLSAVQVVKILNSYTPIDDF
EKRVAPSFVRKVQSILQGNEGSAQLMLDSKYLFQVTFPFSPSPQALEVIQVPSSLKVGFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggctctggcggagttgtacaccaagttcaacagagtgtggatccctgatccagaagat
gtctggaaatcggctgagatcaccaaagattacaaaccagaggaaaatgtgcttgacctg
ctattggaggatggcacagaattaaaatacccccttgattcagttaccaaggacctgccc
catctgcgtaaccctgacatccttgttggtgaaaatgacctcactgctctcagttacctc
catgagcctgcggtcctgcataacctcaaagtgcgctttgtggaatccaagattatctac
acctactgtggtattatacttgtggccattaatccgtacaagcaactgcctatctatgga
gatgccatcatacatgcatacagtggccaaaatatgggagatatggaccctcacatattt
gctgtagcagaggaggcatacaaacagatggctaggaacaataagaaccagtctattata
gtaagtggggaatcaggagctggaaagaccgtgtctgctcgctatgccatgagatacttt
gccactgttagtaaatctggcagtaagacgcacgtggaagataaagtcctggcatcaaac
ccaataacagaggctatcggcaatgctaaaacaacaagaaatgataatagtagtcgattt
ggaaaatacactgaaatcagttttgaccgacgctatcagatcatcggagcaaacatgaga
acgtatctgctggaaaaatcaagggtcgttttccagtcagagaatgagagaaactaccat
atattctaccagctctgtgcctctgcaaaccaaccagagttcaagaatttgaagctggtt
agtgctgatgaatttagatatacctgcatgggtggcaaaatgtgcattgatggagtggat
gacagagctgacatgattgaaacccagaggactttctctctactaggtttaaaagaggac
tttcagatggacgtgtttaaggtactggcagcagtcctgcatttaggcaatgtagaaatc
aaaggcatcagtgacgacaggtcttctgtcaatttgagtgacaaacacctggctgtgttc
tgtggtctactcaacatcagccctgatggagtgtcccgctggctgtgcaatcggaaaatc
atcacggcctctgagactgtggtgaaacccatgccaaagctgcgagccatcaatgccagg
gatgccctggccaaacagatctatgcccacctgttcaactgcatcattgacagaatcaac
aagagtcttcagtttcctgggaagaagcatacctttattggagttttggacatttacggg
tttgaaacatttgaaaccaacagttttgagcagttttgcattaactatgccaatgaaaaa
ttgcaacagcagtttaacctgcatgtgtttaaactggaacaagaagaatacatgaaggag
gacattccctggatgctgattgatttctatgacaaccagcctgtcattgacctcattgaa
gctaagatgggtatcttggatttgttagatgaagaatgcctgtttccacagggcaaagat
gagaactggcttcagaagctgtataacaattatctgaacaagaaccctctgtttgagaag
ccaaggatgtcaaaccagtcatttgtaatccagcactttgctgataaggtagaatacaga
tgccacggatttctggagaagaacagagattcaatgtatgaagagctgattaacatactg
aaggccagtaagtttgatctccttgccaacttctttcaagaggaagaaccaacttttccc
ttcagtaaaagcattaacttcaaagctgccacacctggaataaagccctcaaacaaacag
ctccggacgactgttggcaacaagttccgcagctctctgtacttgttaatggagactctg
aatgccacaacgcctcactatgtacgatgcataaaaccgaatgatgaaaaactcccattc
gaatatgattcaaagagggtcgtacagcagttgcgagcctgtggggttcttgaaaccatt
cgtattagtgctcaaagctatccatcaaggtggacgtatactgagttttacagtcgctac
agcattctaatgacacagcaagaggttacgctgaatgataagaaacagacttgcaagaca
gtgctgcagaggttaattcatgattcgaaccagtacaagttcggcagaacgaagatcttt
ttccgagcaggtcaggtggcgtacctggagaagctgcgatcagaccggctgcgaggagcc
tgcatcacgatccagaagaacctccgcggctggacccagcgcaagaagtacctccgcatg
agagaggccgccatcatcatccagcagtatgtgcgaggcaagcgggcaatacggcaaaca
gtgagtgctgctaccctgaaacagggttgggcagccatcgttatccagaagcactgccgg
ggcttcctggtacgccgggtctggcagcttattcaggttgccacggtgaccatccaggcc
tttgctcgggggtggcttgcgcgaatacgattcaagaagattcttcaagaacacaaggct
acaatcctgcagaagcatacgcgagcctggctagccagacgcaggtttcagagcattcgg
agagtggtgctgaatgtgcagctctcttacagagtgcagcgactgcagaagaaactggag
gaccagaacaaagagaaccacgggttactggagaggctgacaggactggccagcgctcac
tcccacgatgtagacaagctgcagaaactggaagccactcttaagaaatccacggcgcag
aagatgatgtttgaggaagacttgaagaaacataaggaggaaaccaaacaggttataacc
cagctacaaacccacaatgccatccttactgaagagaagctgaaactggagaaaaaactt
caagagaagactcaggaaatgaaagataatgtagatgacatcaggaaaaaactcttcgag
gatctggcaggagtggaacgggaaagaaaaatcctggagaatggctttgagattcaaaag
gacgactatgagaagcagatagaagccctgaaagaggagatgaagtgtctgagagaggag
aagattcagctgcagcagcaggtccaagaagagtttctcattaatgacggactcaagcag
gacatcgcccagctcacaaaccaggccaaggtaatcccagacctgcggaaagagattgtg
gttctggagacacagaaaaaagagcaggacaagcagttcaaggaacaaatgcaggaaacc
agagcgaaaatgtcagaggtgacaaggcagcttcttagaggactgaacgaggaagagctg
ctttgcaggttatcaaaagaggatatggaacaaatcaatgaagacggagagctactgttt
gcttatgaaggtctgaagaaagctatcagggtgatggagaaccatttccaagcacagaaa
gagagctacgaaaaagaaatcgagagcctaaactacaaggccgagcatctccagcatgag
acagatcatttgcaaaaactgttcagagaagagaacaacatgaacgacaacatccgccag
gaggtcaagcggctggcctctgaaaacatggcaattccgcagtataaacagcaaatatcc
gaactacagaggaaaaaccaagagctggacaaccgcttgaaggaccaggctatagaactg
agagggaacatggaagtaattgcttgtgagctacgcaatacccttgaagaagaaggctca
cagcgaagaatactggagcttcagaaagaaacctatgagaaggagatgcaggagctgaaa
gagaaggttgcggagaaacaggatgagaatgaccagctgcagaaacagttccaagccgag
agccaagccaaaaacaagttgcgacaagaagcctcgcgactgattgcggaaaacatggac
tttgaagaacaggttgatatgaaagacagattgataaagaaacttcaaaatcaaatacag
gccttccggactattgagaaagtaaatcaagtccaagaaccagttgcaccaaaggaatac
ctcggaatgctggaatacaaaaaggatgatgaatcaaggctcattaaaaacatcattctg
gatatgaagcccagaggcgtggtggtgaacatgatcccaggcctgccagcgcacatcttg
ttcatgtgtgtgaggcatgctgattacctcaacgacgccgaccagctcaagtcattgatg
aactcaatcataaacgggattaagcaagtcattcaggatcaccctgaggattttgagacg
ttgtcattctggctctccaacacatgccacttgctgaactgcttaaagcaatacagtggg
gaggaggaatttatgaaatacaatagtccacatcagaataagaactgtctgaagaatttc
gacctgtctgagcacaggcagatactcagtgacctggccattcgcatctatcagcagttc
atcaacgtcatggagagcggcattcagccaatgattgtgccaggaatgctggagcacgag
agtctccaaggtatttccagtatgaaacctacaggattccgcaagcgttccaccagtatc
tatgaagacacagaggtgtataccatctccagcatcctgcagcagctgggctacttctac
agcaccatgtgtcaacacggcatggacccggagctgatcaagcaagccgtgaagcagctc
ttctatctcatcacagccgtcacgctgaacagcatcttcctccggaaagacatgtgctcc
tgcagaaagggaatgcagatcaggtgtaacatcagttacctggaagaatggctaaaggag
aagaatcttcagggcagctgtgccatagacacaatggagcctctttctcagacggcctgg
ttacttcaggtcaacaaatcaacagacgaggatgccaaggaaatatgtgaaagatgttct
gggctttctgctgtccaggtagtaaagattctcaactcgtacacacctatagatgatttt
gagaagagggtagctccatcatttgtacgcaaagttcagtccattttgcaggggaatgag
ggctctgcacagctgatgctggacagcaagtatctcttccaagttacctttcctttcagt
ccctctccacaagcactggaagtgatccaggttcccagcagcctcaaagtgggattccta
actcgaatctga
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integrated database retrieval system
