Polyodon spathula (Mississippi paddlefish): 121299324
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Entry
121299324 CDS
T07273
Name
(RefSeq) AP-3 complex subunit beta-2-like isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121299324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121299324
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
AP-3 complex
121299324
Endosome - Golgi transport
121299324
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
121299324
NCBI-ProteinID:
XP_041082943
LinkDB
All DBs
Position
24:5995445..6056271
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AA seq
1165 aa
AA seq
DB search
MKPMQRLFQLPVTAVNLVKNAQTPEEAKSPVLSPDGGQQTWYNALQSDELRLLRTPDQET
PLDETAPSSGQTQPLRHDDLKEMLDSNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNV
ACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVTII
VPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDPDQKDQLIEVIEKLLADKTTLVAGSV
VMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVIINMLTRYARTQFLNPNHNESLLE
ESAEKAFYGSDEEETEEKDEKEEVAALAKRKAYVMDPDHRLLLRNTKPLLQSRNAAVVMA
VAQLYFHLAPKAEVGVIAKAQVRLMRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIR
STDPTQIKVLKLEVLTNLANETNISTILREFQTYIKSMDKDFVAASIQAIGRCATNIGEV
RDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHSDIIKHMAKLTDSIQVPMARAS
ILWLIGEYCEHVPKIAPDVLRKMAKSFTNEEDIVKLQIINLAAKLYLTNSKQTKLLTQYV
LNLAKYDQNYDIRDRARFIRQLIVPTEKSGVLSKYAKKLFLALKPAPVFESPFKDRDHFQ
LGSLSHLLNAKATGYQELPAWPDVAPDPSVRNVELDEVISPSEGRIGLLGDWREVPEWTK
CSSREKRKEKVEKPFYSDSEGESGPTESADSESELPSELESGGGSGSEEGGSGSGSEESD
EGSESGKEKKKKPEKIKVRKTLPESAESEHSGEEEKSVRKRKERKASSESSSEEEEESSS
ESSSSESESEEESESEPETKKKKKITLSKPAPKEPKNEVSLLDLDDFIPTPSPQMTPINN
IVSNSLANDLQGLSFTDSSLSPTMISPSFSSVKTYELLHRITGEGLAVEYCFSRQPCSLD
PHMVAVQIQFSNNTDTEAKSLRIQEPKLMSGMRMQEFPEIEVLAPGETVTVSMGIDFCDS
TQAANFQLCTQTRKFYVSIQPPVGELMMPVFMSENEFKKEQVQLIKLSMGHLMGMNEINE
KLTLGEKCQSDHAIVQRVTSAANLSRVPCGSDREYRFAAKTVTSGSLVLVTVVTKEGKAA
QLTVNCEKMVIGTMLVKDILQALSQ
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatgcaaagactgtttcagctgccggtgactgctgtgaatctagtcaaaaac
gctcagacaccagaggaagctaagagcccggttttgtcacctgatggcgggcagcaaaca
tggtataatgccttgcagtcggatgagctgcggctgttaagaacgccggatcaggagacg
ccattggacgagactgcacccagtagcggccagactcagccactgcgacacgatgacctg
aaagaaatgctggacagtaacaaggactccctgaagctggaggctatgaagaggattgtc
gctatgattgccagaggaaagaatgcttcagacctgtttccggcagttgtcaagaacgtg
gcctgcaaaaacattgaggtgaagaagctagtgtatgtgtacctggtccggtatgcagag
gaacagcaagacctggcgctgctctccatctccaccttccagagggggttaaaggacccc
aaccagctgatccgagccagtgcactgcgagttctctccagtattagggtcaccattatc
gttcccatcatgatgctggccatcaaggaagcagcgtccgacatgtccccctacgttcgc
aagacagccgcccacgccatccccaaactctacagtttggacccagatcagaaggaccag
ttgattgaagttattgagaagctcttggcagacaaaacaacgctggtagcaggcagtgtt
gtgatggcgttcgaggaggtctgccccgagcggatcgatctcattcacaagaactatcgc
aagctgtgtaacctgctcattgacgtcgaggagtggggccaggtggtgatcatcaacatg
ctgacccgctacgccaggacccagttcctcaaccctaaccacaacgagtcgctgctggag
gagagcgcagagaaggcgttctacggctctgatgaggaggagacggaggagaaggatgag
aaggaggaggtggctgccctggccaagaggaaggcctatgtgatggaccctgaccatcgg
ttgctcctgcgcaacaccaagcccctgctgcagagcaggaacgcagcggtggtgatggcg
gtcgctcagctctacttccacctggctccaaaagctgaggttggtgtgatcgcgaaagcc
caggtgcgcctgatgaggagccacagtgaggtccagtatgttgttcttcagaatgtggca
accatgtctatcaagcgcaggggaatgtttgagccatacctgaagagcttttacatccgg
tctacagaccctacccagatcaaagtgctcaagttggaggttttgaccaacctggcgaat
gaaactaacatctccaccatcctaagggaatttcagacctacattaagagcatggacaag
gactttgtcgccgcttccatccaagccattggtcgctgtgccaccaacatcggagaggtg
cgggacacctgcctgaatggactggtgcagctgctctcaaaccgggacgagctggtggtt
gcagagtcagtggtggtgattaagaagctgctgcagatgcagcctgctcagcacagtgac
atcatcaagcacatggctaaactaactgacagcatccaggtccctatggctcgggccagc
atcctgtggctcataggggaatactgcgaacacgttcccaagatcgcccccgacgtgctg
aggaagatggcaaagtccttcaccaacgaggaagacatcgtcaagctgcagatcatcaac
ctggctgccaagctgtacctgaccaactccaaacagaccaaactcttgacccagtatgtt
ctcaacttggccaagtacgaccagaactatgacatcagagaccgagcgcgcttcatccgc
caactgatcgtccccacagagaagagcggggtcctcagcaagtacgccaagaagctgttc
ctggccctgaagccagcgcctgtctttgagtcaccttttaaagaccgggaccacttccag
cttggctcactgtcccacctgttgaacgccaaggccaccggctatcaagagctgcccgcc
tggccagacgtggcccccgacccatcagtgcgcaacgtggagctagatgaagtgatctcg
ccgagcgagggacggatcggcttgttaggagactggcgagaggttcctgaatggaccaag
tgcagcagccgtgagaagcgcaaggagaaagtggagaagccattctactctgattctgag
ggagagtctggacccactgaatctgcagacagcgagtcggagctgccaagtgagttggag
agtggaggtgggagtgggagcgaggagggcggctctggatcgggtagcgaggagagtgac
gaaggctctgagtctgggaaagagaaaaagaagaagcctgaaaagatcaaagtcaggaag
accctaccggagagcgcagaaagcgagcacagcggagaggaggagaagagcgtgaggaag
aggaaggagaggaaagctagctctgagtcttcatctgaggaagaggaggagagctcttct
gaaagcagctcgtccgagtccgagtcggaagaggaatcggagtctgagcctgagaccaag
aagaagaagaagatcacactttccaaaccggctcctaaagaacccaaaaatgaggtctcc
ctccttgacttggatgacttcatccccaccccatcccctcagatgacccccatcaacaac
attgtgtccaacagcctggccaatgacttgcaagggctgtcctttactgacagctccctc
tccccgacgatgatcagcccctcgttcagctccgtgaaaacctacgagcttctgcaccgc
atcaccggggagggcctggcggtggagtactgcttcagccgccagccctgcagcctcgac
ccgcacatggtggcagtgcagatccagttcagcaacaacacagacaccgaggccaagagc
ctgcgcatccaggagcccaaactcatgtcaggcatgaggatgcaggagttccctgagatc
gaggttctggctcctggtgaaacagtcactgtcagcatgggaattgatttctgtgactcc
acgcaggctgccaacttccagctgtgcacccaaacccgcaaattctatgtctcaatccag
ccaccagtgggtgagctgatgatgcctgtgttcatgagtgaaaatgagttcaagaaagag
caagtgcagctaataaagttgagtatgggtcatctgatgggaatgaatgagattaatgag
aagctgactctgggagagaaatgccagagtgaccacgccatcgtccagagagtgacctcg
gccgccaacctgagcagggtgccctgcgggtctgacagagagtacagatttgctgctaag
acggtgaccagtggcagcctagtgttggttaccgtggtgacgaaagagggcaaggcggcc
cagctgacagtgaactgtgagaagatggtgattggcaccatgctggtgaaggacattctt
caggctctgtcacagtga
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