Polyodon spathula (Mississippi paddlefish): 121299327
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Entry
121299327 CDS
T07273
Name
(RefSeq) leucine-rich repeat-containing protein 49-like
KO
K16606
leucine-rich repeat-containing protein 49
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121299327
04812 Cytoskeleton proteins [BR:
pspa04812
]
121299327
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
121299327
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
121299327
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_EndoS
GadE_N
Motif
Other DBs
NCBI-GeneID:
121299327
NCBI-ProteinID:
XP_041082952
LinkDB
All DBs
Position
24:3470336..3682627
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AA seq
798 aa
AA seq
DB search
MLPHKYNKGRLVAHTVNGYGLQLAIQRRTSQKQLDFRLGKDLPSHNREPTQDNLRSSLLR
TEGMTMSTGRPPVSPKLAYASEFVIQERSVPQASISPCLGSSGDASAQSFRSRARQVSRS
AGTSPSNSNGATINSANEHFVKSLFKPGTPVFLRSPEDSAANPDRLDLDRRNLLVCPLLE
GEENLRLLNLQHNLISEIQHLSHLKRLIFLDLYDNHITEISGLSALTSLRVLMLGTNRIS
RISGLESLSKLDVLDLHGNQISKMENLSHLLELRVLNLAGNNIVCVEELRGMNSLTELNL
RRNHITTVRDVSYLPSLQRLFLSCNSITNFEDIACLSDSLSLTEVSLDENPIAQESWYKQ
TALRYMVQLRHLDMKRITDEERRMASVIARKEEEKKKEGHKQAIQKEKRRLAIRNAASQW
ETLIHKDSSTAKSFLELPAQNGSKEQVSPVNGTPTELFTEEPRGLSPAGSAERLPGGREG
SERRPRAPSRPNSPRDARSSEGAGGPSVQCLSVSDSHLAELDGETLRLFGLGALEALERG
WGVQTAGAVTAIAFRYINYDAIAPTLPRLRVKFPNVTHLIFSETNIHRLPQLAALAQVRR
LDQLTIHPEGNPVVSLALWRSFAIFRLGHFNLQRINGEEVTMNDVIIAERLFGTLAHITA
AETPHYRLLLLLGESRKHQLQFLLDGRGRQVGLSPVELWENRKLLGEGLGRAIFNYPSRD
GDTDRSENAAHAGQERAQVSRCYVQGLVKEAASINLKGESLHKLWSSLFMELVRDSVVEM
RDRPAFRRGCLQRISETK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctcacaaatacaacaaagggaggctggttgctcatacggtcaatggctatggc
ttgcaactggcgatccagaggcgcacttcacagaaacagttggacttccgcctgggtaaa
gacttgcctagccacaacagagagcctacccaggataacttgagaagcagccttcttcgg
actgaagggatgacgatgagcactggcagacccccagtgagtcccaagctggcgtatgcc
agtgagttcgtcattcaagagaggtccgtcccccaggcatcgatatccccctgcctggga
tcatctggagatgcctcagctcagagcttcaggtccagagctcggcaggtgtctcgcagt
gcaggcaccagcccctccaacagcaatggagccaccatcaactctgccaatgagcatttt
gtgaaaagcctatttaagccggggacccctgtctttttacgctcccctgaggacagcgca
gccaaccctgaccggctggatctggacaggcgaaatctgctcgtctgccccctgctggag
ggagaggagaatttgcggctgctcaacttacagcacaacctgatctctgagatccagcac
ctctctcacctaaagcggctcatcttcctcgacctgtatgacaaccacatcactgagatc
tccgggctatctgcactcaccagcctgcgcgtcctcatgctgggcaccaacagaatttca
aggatttctggtctggagagcctgtccaaactggatgtcctggatcttcatggaaaccag
atctctaaaatggagaacctgtctcacctgttggagctgcgagtgctgaacctggctgga
aataacattgtgtgtgtggaggagctgagaggaatgaactcactgactgaactcaacctc
cgtcgtaaccacatcacaactgtgagagatgtcagctatctgccctccctccagcgcctc
tttctcagctgcaacagcatcaccaattttgaagacatcgcctgcctctccgattccctg
tccctcactgaggtctccctggatgagaatcccatagctcaggagtcatggtacaagcag
actgccctgcgctacatggtgcaactacgacatctggacatgaaaagaatcacggacgaa
gaacgccgcatggcatcagtcatagcaagaaaggaggaagagaagaagaaggagggacac
aaacaagccattcaaaaggagaagcggcggcttgcaattcggaatgcagcctcacagtgg
gagactctaattcataaggacagcagcactgcaaagagctttctggagctccctgctcag
aatggcagtaaggagcaggtcagtcctgtcaacgggactcccactgaactcttcacagag
gagcccagggggttaagtccagctggcagtgcagagaggttacctggggggagagagggc
agcgagagaaggccccgagccccaagcagacccaacagcccccgggatgccaggtcctcg
gagggggcgggggggcccagtgtgcaatgtctgtctgtgtcggactctcatctggcagag
ctggatggtgaaacactgaggctgtttggtcttggggctctggaggcactggagcgaggc
tggggggtgcagactgcgggtgccgtgaccgccatcgccttccgctacatcaactacgat
gccatcgcacccaccctgccccgattacgagtcaagtttcccaatgtaacgcacctgatc
ttttctgagaccaacatccaccggctgccccagctggccgctctggctcaggtccggcgg
ctcgaccagctgacaatccaccctgagggcaacccggtggtcagcttggcgctctggagg
tccttcgccatcttccggctcggtcacttcaacctgcagaggatcaacggggaggaggtc
accatgaatgatgtgataatagcagaaaggctgtttggaactctggctcacatcactgct
gctgaaactccacactatcgcctactcctgctgctgggagaatccaggaagcatcagctg
cagttcttgctggatggccgagggcgacaggtgggcttgagccctgtggagctctgggag
aacaggaagctgctgggagaggggctgggccgagccatcttcaactaccccagcagagat
ggggacacggacaggagcgagaacgctgctcacgctggccaggagagggcgcaggtgagc
cggtgctatgtgcaggggctggttaaggaagcagcaagcatcaacctgaaaggagaatct
cttcacaagctgtggtcatcactgttcatggagctggtccgagacagtgttgtggaaatg
agagaccgcccagccttccgcagaggctgccttcagaggatctcagagaccaaataa
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